CF503888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.786e-42 Identity = 84/117 (71.79%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 46 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 VPLG+LFFISGLVVNL+QAVC+V IRPLSKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLP Sbjct: 10 VPLGILFFISGLVVNLLQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLP 126
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.752e-42 Identity = 84/117 (71.79%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 46 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 VPLGLLFFISGL VNL QAVC+V IRPLSKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLP Sbjct: 9 VPLGLLFFISGLAVNLFQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADNETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLP 125
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.207e-42 Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 46 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 VPLG+LFFISGLVVNL+QAVC+V +RP+SKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLP Sbjct: 9 VPLGILFFISGLVVNLLQAVCYVLVRPMSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLP 125
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.171e-40 Identity = 80/117 (68.38%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 46 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +PLGLLF +SGL+VN IQAV FVTIRP SK+ YRRINR AGVK++L D ETYR MGKEHAL++SNH+SDIDWL+GW+LAQRSGCLGSTLAVMKKSSKFLP Sbjct: 10 LPLGLLFLLSGLIVNAIQAVLFVTIRPFSKSFYRRINRFLAELLWLQLVWVVDWWAGVKVQLHADEETYRSMGKEHALIISNHRSDIDWLIGWILAQRSGCLGSTLAVMKKSSKFLP 126
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: LPAT3_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.793e-34 Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 1 Query: 46 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +P+G+LF ISGL+VN+IQ V F+ +RP S++ YRRIN+ A +KI L+VD ET L+GKEHALV+SNH+SDIDWL+GWV+AQR GCLGS+LA+MKK +K+LP Sbjct: 10 IPVGVLFLISGLIVNIIQLVFFIIVRPFSRSLYRRINKNVAELLWLQLIWLFDWWACIKINLYVDAETLELIGKEHALVLSNHRSDIDWLIGWVMAQRVGCLGSSLAIMKKEAKYLP 126
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: PLCC_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Pongo abelii GN=AGPAT3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.850e-16 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 52 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +G +F +SGLV+N +Q +C + + P+SK YRR+N + + LF D+ T GKEHA+++ NH +ID+L GW + +R G LGS+ + KK ++P Sbjct: 17 VGFVFVVSGLVINFVQ-LCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVP 130
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: PLCC_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Homo sapiens GN=AGPAT3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.850e-16 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 52 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +G +F +SGLV+N +Q +C + + P+SK YRR+N + + LF D+ T GKEHA+++ NH +ID+L GW + +R G LGS+ + KK ++P Sbjct: 17 VGFVFVVSGLVINFVQ-LCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVP 130
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: PLCD_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Bos taurus GN=AGPAT4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.882e-14 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 61 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +F +SGL++N IQ +C + + P++K +R+IN +G + ++ D Y GKE+A+VV NHK +ID+L GW LA+R G LG + + KK ++P Sbjct: 20 VFIVSGLIINTIQ-LCTLLLWPVNKQLFRKINCRLSYCVSSQLVMLLEWWSGTECVIYTDPRAYPKYGKENAIVVLNHKFEIDFLCGWSLAERFGVLGGSKVLAKKELAYVP 130
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: PLCC_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Mus musculus GN=Agpat3 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 52 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +G +F +SGL++N Q +C + + P+SK+ YRRIN + + LF D+ T GKEH +V+ NH +ID+L GW + +R G LGS+ + K+ +P Sbjct: 17 IGFVFVVSGLIINFTQ-LCTLALWPISKHLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHVVVILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVP 130
BLAST of CF503888 vs. ExPASy Swiss-Prot
Match: PLCD_RAT (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus GN=Agpat4 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.475e-14 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 61 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLP 396 +F SGL+VN IQ +C + I P++K +R+IN +G + ++ D + GKE+A+VV NHK +ID+L GW LA+R G LG++ + KK ++P Sbjct: 20 VFIASGLIVNAIQ-LCTLVIWPINKQLFRKINARLCYCVSSQLVMLLEWWSGTECTIYTDPKASPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVP 130 The following BLAST results are available for this feature:
BLAST of CF503888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503888 ID=CF503888; Name=CF503888; organism=Citrus sinensis; type=EST; length=396bpback to top |