CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.959e-80
Identity = 122/155 (78.71%), Postives = 136/155 (87.74%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      WSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL
Sbjct:  148 KNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVL 302          

HSP 2 Score: 56.225 bits (134), Expect = 1.959e-80
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 1
Query:    1 ILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            ILPT +LP +FDWRD GAVT VK+QG+CGSC
Sbjct:  126 ILPTQNLPEEFDWRDRGAVTPVKNQGSCGSC 156          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.104e-66
Identity = 119/155 (76.77%), Postives = 135/155 (87.10%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      WSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG DG +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL
Sbjct:  151 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVL 305          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.304e-64
Identity = 115/156 (73.72%), Postives = 135/156 (86.54%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVL 532
            K +      W+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSNFSV++ DEDQ+AANLVK+GPLAV INA WMQTY+ GVSCPY+C K  LDHGVL
Sbjct:  148 KDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVL 302          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 6.471e-64
Identity = 112/155 (72.26%), Postives = 130/155 (83.87%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      WSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+D G CKFDKSKI A+V NFSV+S DE Q++ANL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL
Sbjct:  153 KNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSD-GKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVL 306          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.738e-38
Identity = 83/177 (46.89%), Postives = 105/177 (59.32%), Query Frame = 2
Query:    5 SPPTIFLLTLTGVITAPLLASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            S PT F     G +T      K +      WSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+  +AV  Q YIGGV         LDHG+L
Sbjct:  117 SIPTAFDWRTRGAVTPV----KNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGIL 289          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.637e-35
Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVL 532
            K + H    W+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY G D  SC F+K+ I A  + F  +   DE++M   +   GP++V I+A     Q Y  GV     C +  LDHGVL
Sbjct:  138 KDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGID-DSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVL 288          

HSP 2 Score: 48.9062 bits (115), Expect = 4.637e-35
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+HGAVTGVKDQG CGSC
Sbjct:  122 VPKSVDWREHGAVTGVKDQGHCGSC 146          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.474e-34
Identity = 70/158 (44.30%), Postives = 92/158 (58.23%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVL 532
            K +      WSFS TG+ EGAH L T +LVSLSEQ LVDC     PEE+     GC+GGLMN+AF+YI+K  G++ E  YPYT   G +C F+KS I A +  +  I++  +    N  +HGP++V I+A     Q Y  G+     C    LDHGVL
Sbjct:  139 KDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCS---GPEEN----FGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVL 289          

HSP 2 Score: 39.2762 bits (90), Expect = 8.474e-34
Identity = 18/30 (60.00%), Postives = 19/30 (63.33%), Query Frame = 1
Query:    4 LPTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            L TN  P   DWR   AVT +KDQG CGSC
Sbjct:  120 LQTN--PKSIDWRTKNAVTPIKDQGQCGSC 147          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.398e-33
Identity = 69/159 (43.40%), Postives = 88/159 (55.35%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVL 532
            K +      W+FS TG+LEG HFL TG L+SL+EQQLVDC     P+       GCNGG MN AF+YI    G++ E  YPY   D GSC+FD + +AA  S  + I+S  +      V+  GP++V I+A     Q Y  GV     C   YLDH VL
Sbjct:  123 KDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIKANNGIDTEAAYPYEARD-GSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVL 273          

HSP 2 Score: 41.9726 bits (97), Expect = 5.398e-33
Identity = 18/28 (64.29%), Postives = 19/28 (67.86%), Query Frame = 1
Query:   10 TNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            T    T+ DWR  GAVT VKDQG CGSC
Sbjct:  104 TGPQATEVDWRTKGAVTPVKDQGQCGSC 131          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.468e-32
Identity = 63/158 (39.87%), Postives = 91/158 (57.59%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVL 532
            K +      W+FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+ +Q Y  G+S P+   C KY LDH VL
Sbjct:  121 KNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVL 268          

HSP 2 Score: 46.9802 bits (110), Expect = 4.468e-32
Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 1
Query:   13 NDLPTDFDWRDHGAVTGVKDQGACGSC 93
            N++P +FDWR+ GAVT VK+QG CGSC
Sbjct:  103 NNIPKNFDWREKGAVTEVKNQGMCGSC 129          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.662e-31
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVL 532
            K +      W+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  MQ Y GGVS P+  +C  K LDHGVL
Sbjct:  410 KNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVL 558          

HSP 2 Score: 43.5134 bits (101), Expect = 3.662e-31
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            +LP +FDWR   AVT VK+QG+CGSC
Sbjct:  393 ELPKEFDWRQKDAVTQVKNQGSCGSC 418          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
A494_ARATH1.959e-8078.71Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
RD19A_ARATH3.104e-6676.77Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA1.304e-6473.72Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP1_MAIZE6.471e-6472.26Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI2.738e-3846.89Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SARPE4.637e-3544.65Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP2_DICDI8.474e-3444.30Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP2_HOMAM5.398e-3343.40Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL_SCHMA4.468e-3239.87Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_DROME3.662e-3140.88Putative cysteine proteinase CG12163 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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