CF503910

Overview
NameCF503910
Unique NameCF503910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:67..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 7.740e-60
Identity = 109/209 (52.15%), Postives = 147/209 (70.33%), Query Frame = 3
Query:    6 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++K+LG W SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+K+ PA L  +  +   E + AA+ Q +  L  LE AF +CSKGKPFFGG  +GF+D+  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVP 214          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.707e-49
Identity = 99/206 (48.06%), Postives = 141/206 (68.45%), Query Frame = 3
Query:    6 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPAL-KSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            DVK+LG   SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +E  +E+  E L  LE+      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLP 205          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.033e-45
Identity = 96/205 (46.83%), Postives = 126/205 (61.46%), Query Frame = 3
Query:    6 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            +V +L  WPS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLP 202          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.559e-44
Identity = 94/205 (45.85%), Postives = 126/205 (61.46%), Query Frame = 3
Query:    6 DVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            +V +L  WPS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P
Sbjct:    5 EVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLP 202          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.278e-42
Identity = 91/206 (44.17%), Postives = 130/206 (63.11%), Query Frame = 3
Query:    3 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++VK+LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   +K+       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   KW   +   + +K+ +P
Sbjct:    2 AEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLP 199          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.118e-41
Identity = 89/206 (43.20%), Postives = 130/206 (63.11%), Query Frame = 3
Query:    3 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++VK+LG W SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P
Sbjct:    2 AEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLP 199          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.766e-41
Identity = 91/206 (44.17%), Postives = 129/206 (62.62%), Query Frame = 3
Query:    3 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++VK+LG W SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P
Sbjct:    2 AEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLP 199          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.717e-41
Identity = 93/196 (47.45%), Postives = 125/196 (63.78%), Query Frame = 3
Query:    3 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFC 590
            ++VK+LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K     KS  S    E +E A E+  E L +L++ F    K K  F G + GF DI       ++ + E++  + L    K P    W + +C
Sbjct:    2 AEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSK--GEEQEKAKEEAYEMLKILDNEF----KDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYC 189          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.051e-40
Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 3
Query:    9 VKVLGAWPSPFVMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K +PAL ++  A    A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E++  + L+D   TP L  W++RF A  A K V+P
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLP 213          
BLAST of CF503910 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.373e-40
Identity = 90/206 (43.69%), Postives = 123/206 (59.71%), Query Frame = 3
Query:    3 SDVKVLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 620
            ++V +L  WPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K++   + + S  G E +E A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P
Sbjct:    4 NNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLP 201          
The following BLAST results are available for this feature:
BLAST of CF503910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTU6_ORYSJ7.740e-6052.15Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX6_SOYBN4.707e-4948.06Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX4_TOBAC7.033e-4546.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC4.559e-4445.85Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_TOBAC7.278e-4244.17Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.118e-4143.20Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC2.766e-4144.17Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU4.717e-4147.45Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_MAIZE1.051e-4043.19Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTXA_TOBAC1.373e-4043.69Probable glutathione S-transferase parA OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-397 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503910 ID=CF503910; Name=CF503910; organism=Citrus sinensis; type=EST; length=620bp
AAAGCGACGTGAAGGTTTTGGGTGCGTGGCCAAGCCCATTTGTGATGAGG
GCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTTTCTGGAGGA
GAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCACA
AGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCTC
ATCATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTAT
TCTTCCTTCTGATCCTTATGACCGTGCCGTTGCTCGTTTCTGGGCCGCTT
ATGTTGATGAGAAGTTGTTCCCTGCCTTGAAAAGCATTGGTAGTGCAGAT
GGAGCGGAAGCTAAGGAAGCTGCGATTGAGCAATTGATTGAAGGCTTGGT
TTTGCTGGAGGATGCTTTTGTTAAGTGTAGCAAAGGGAAGCCTTTCTTTG
GTGGAAGCCAAATTGGGTTTCTTGACATTGCATTTGGTTGCTACTTGGGA
TGGGTGAGAGTGACAGAGAAAATGATTGAGGTGAAGCTCCTTGATGAAGT
CAAAACTCCTGGACTGTTCAAATGGGCTGAGAGATTCTGTGCTGATGCCG
CTGTCAAAGATGTTATGCCT
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