CF503912

Overview
NameCF503912
Unique NameCF503912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6131 contig Csv1_Contig6131:21..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 86/203 (42.36%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  109 SFSPADDYLIDCGSTVDTTV-DNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDT-AKFVNGDKIDNFDALSKQALEVMYRVNVGGPK 711
            +F+P D+YLI+ GS  +T+    R F+SDSS   S  L+ + RS SI  ++ +   P +YN+ARVF     Y F++  KGTH +RLHF    +S+F    A+F VL+NG+ V+++FS  +++    VKE+++ I+   L I+FLP   S F FVNA+E  SAPKD I+D   K V  +    F  LS Q LE ++R+NVGG K
Sbjct:   25 AFTPTDNYLINSGSNTNTSFFTTRSFLSDSSEPGSSFLS-TDRSISISDTNPSPDSPVLYNTARVFPVGGSYKFQVTTKGTHFIRLHFAPFKASRFNLRSAKFRVLINGFSVINSFSTSSVV----VKEFILKIDDPVLEISFLPFKASGFGFVNAVEVFSAPKDYIMDQGTKLVIPNSAQIFSNLSSQVLETVHRINVGGSK 222          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30
Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:  112 FSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHR-NGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGP 708
            F+P D+YLI CGS+ + T  NR+F+ DS  +S   L     + S+  S   N     IY +ARVF   + Y FKI   G H +RLHF  +N+S +    A   V+   +V+L+NFS  N   S   KEY + + +E L ++F+P+  S   FVNAIE +S P +LI D A  +N      F  LS  A E +YR+N+GGP
Sbjct:   26 FNPPDNYLISCGSSQNITFQNRIFVPDSLHSS---LVLKIGNSSVATSTTSNNSTNSIYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFNNFNGSYIFKEYTVNVTSEFLTLSFIPSNNS-VVFVNAIEVVSVPDNLIPDQALALNPS--TPFSGLSLLAFETVYRLNMGGP 219          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.626e-28
Identity = 84/203 (41.38%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  100 IALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGP 708
            I   F+P D+YLI+CGS  + T+  R+F+SD  + SS LL   T SK I  S       +IY++ARVF   S Y F +  +G H VRL+F   +   F    A+F V    +V+LS+F+V    +S  VKEY + +    LV+ F P+  S FAFVNAIE IS P  LI  + +FV       F  +S Q LE ++RVN+GGP
Sbjct:   21 ICHGFTPVDNYLINCGSPTNGTLMGRIFLSD--KLSSKLL---TSSKEILASVGGNSGSDIYHTARVFTEVSSYKFSV-TRGRHWVRLYFNPFDYQNFKMGSAKFAVSSQSHVLLSDFTV---TSSKVVKEYSLNVTTNDLVLTFTPSSGS-FAFVNAIEVISIPDTLITGSPRFVGNPA--QFPDMSMQGLETIHRVNMGGP 211          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 81/203 (39.90%), Postives = 119/203 (58.62%), Query Frame = 1
Query:  109 SFSPADDYLIDCGSTVDTTV-DNRLFISDSSRASSHLLT---FSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGG 705
            SF+PAD+YLIDCGS+ +T + D R F SD  ++ + L T     T   SI ++  N     +Y +AR+F   S Y F I   G H +RLHFY LN   +   ++ F V  +  V+L +FS G+  +S   KEYLI+  AEKL + F P  K   AF+NA+E +S P +L+ D+A  V   +  +F  LS  +LE+++R+N+GG
Sbjct:   27 SFTPADNYLIDCGSSDETKLSDGRNFKSDQ-QSVAFLQTDEDIKTSVDSIPITDSNASTLPLYLTARIFAGKSTYSFYISRPGRHWIRLHFYPLNHPLYNLTNSVFSVTTDTTVLLHDFSAGD-TSSIVFKEYLIYA-AEKLSLYFKP-HKGSTAFINAVEIVSVPDELVPDSASSV--PQAPDFKGLSSFSLEILHRINIGG 223          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.598e-26
Identity = 76/204 (37.25%), Postives = 117/204 (57.35%), Query Frame = 1
Query:  100 IALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPK 711
            +   + P D+YLI+CGS+ + TV +R+FISD+   +S+ LT  + ++ +  S+RN    +IY +AR+F   S+Y F +  +G H +RLHF       F    A+F V    +V+LS+F+V    +S  +KEY + +  + L + F P+  S FAF+NA+E +S P  L      F        F  LS QALE +YRVN+GGP+
Sbjct:   21 LCYGYVPVDNYLINCGSSTNVTVTSRVFISDN--LASNFLT--SPNEILAASNRNSN-SDIYQTARIFTGISKYRFSVA-RGRHWIRLHFNPFQYQNFQMVSAKFSVSSETHVLLSDFTV----SSRVMKEYSLNVATDHLELTFTPSGDS-FAFLNALEVVSVPDTLFSGDPSFAGSP--GKFQGLSWQALETVYRVNMGGPR 211          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.560e-26
Identity = 84/212 (39.62%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   97 GIALSFSPADDYLIDCGSTVDT-TVDNRLFISDSSRASSHLLTFSTRSKSIQLSH--RNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSV---GNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILD--TAKFVNGDKIDNFDALSKQALEVMYRVNVGGP 708
            G A  F PADD LIDCGS   + T D R+F SD        + +    + IQ+S    +     IY +AR+F   + Y F +   G H VRLHF    + +F    A F VL   YV+L NF +    N   +A  KEYL+ +   +  + F P MKS  AF+NAIE +SAP +LI D  TA F     +  F  LS  A + +YRVNVGGP
Sbjct:   47 GPATGFKPADDILIDCGSKSSSKTPDGRVFKSDQET-----IQYIEAKEDIQVSAPPSDKVASPIYLTARIFREEATYKFHLTRPGWHWVRLHFLAFPNDKFDLQQATFSVLTEKYVLLHNFKISNNNNDSQAAVQKEYLVNMTDAQFALRFRP-MKSSAAFINAIEVVSAPDELISDSGTALF----PVIGFSGLSDYAYQSVYRVNVGGP 248          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25
Identity = 79/205 (38.54%), Postives = 107/205 (52.20%), Query Frame = 1
Query:  112 FSPADDYLIDCGSTVDT-TVDNRLFISDSSRASSHLLTFSTRSKSIQLSHR-NGKLPE-IYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASV---KEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGP 708
            F PADD LIDCGS   T T + R+F SDS         +      IQ+S   + KLP  IY +A++F   + Y F +   G H VRLHF+   + +F    A F VL   YV+L NF + N    +     KEYL+ +   +  + F P MK   AF+N IE +SAP +LI D    +    ++ F  LS  A + +YRVNVGGP
Sbjct:   51 FKPADDILIDCGSKSSTKTPEGRVFKSDSETVQ-----YIEAKDDIQVSAPPSDKLPSPIYLTAKIFREEAIYKFHLTRPGWHWVRLHFFAFPNDKFDLQQATFSVLTEKYVLLHNFKLSNDNNDSQATVQKEYLLNMTDAQFALRFKP-MKGSAAFINGIELVSAPDELISDAGTSL--FPVNGFSGLSDYAYQSVYRVNVGGP 247          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22
Identity = 76/242 (31.40%), Postives = 112/242 (46.28%), Query Frame = 1
Query:   34 MENLRKNQAXXXXXXXXXXXYGIALSFSPADDYLIDCGSTVDTTVDNRLFISD-SSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVG---------------NIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPK 711
            M  LRK              Y I    + +  +L+DCGS   T VD R ++ D S   S  L  F   + S   S  +    EIY +ARVFD    Y F+   +G + VRLHF          +++ F V  +G  ++ + ++                N  AS+ VKE+L+     KLV++F+P  K  F FVNAIE +S    L  ++   V G +++    L  + +E MYR+NVGGPK
Sbjct:    1 MSKLRKKYLEHLLCVLIFFTYVIGYGEAQSKSFLVDCGSNATTEVDGRTWVGDLSPNKSVTLQGFDAITAST--SKGSSVYAEIYKTARVFDAVLNYTFEGITQGNYFVRLHFSPFAIENHNVNESSFSVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPE-KGSFGFVNAIEIVSVDDKLFKESVTKVGGSEVEL--GLGGRGIETMYRLNVGGPK 237          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 58/202 (28.71%), Postives = 106/202 (52.48%), Query Frame = 1
Query:  109 SFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNS-SQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPK 711
            +++  +++ ++CGS  +     + F+ D++ +S++ ++F+ +   + ++ ++   PEIY + R+F  PS Y FK+   G H VRLHF  + S +  ++              L +FS  N+  +  V+E+L+ +N+ +  I F+P   S  A +NAIE  SAP DL + +A              S + L  +YR+NVGG K
Sbjct:   32 TYTRPENFYVNCGSDSNVFYGGQTFVGDTN-SSTNSVSFTNKGTEV-INDQSSVAPEIYRTVRIFRHPSSYKFKLDSLGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHHLKSFSPQNLTNTPRVEEFLLMMNSLEFEIRFVPD-HSSLALINAIEVFSAPDDLEIPSA--------------SDKNLHTIYRLNVGGEK 216          
BLAST of CF503912 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 58/198 (29.29%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  115 SPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVF--DRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEEISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVG 702
            S +D + I+CGS  + TV+NR F+SD++        FS  +        +G    ++ +ARVF  +  S Y F I + G  ++R++F  L S+      A+F V    + ++  +       ++ V+EY++ +  + L++ FLP   S  +F+NA+E +  P+ LI + AK +   K      LS  A+E + RVN+G
Sbjct:   26 SVSDTFFINCGSPTNVTVNNRTFVSDNNLVQG----FSVGT----TDSNSGDESTLFQTARVFSDESSSTYRFPIEEHGWFLIRIYFLPLVSASQDLTTARFSVSAQNFTLIREYKPS---TTSVVREYILNVTTDSLLLQFLPRTGS-VSFINALEVLRLPETLIPEDAKLIGTQKDLK---LSSHAMETVSRVNMG 208          
The following BLAST results are available for this feature:
BLAST of CF503912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
Y5241_ARATH5.223e-3542.36Probable receptor-like protein kinase At5g24010 OS... [more]
THE1_ARATH5.059e-3039.50Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
HERK_ARATH3.626e-2841.38Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5613_ARATH4.009e-2739.90Probable receptor-like protein kinase At5g61350 OS... [more]
Y5597_ARATH2.598e-2637.25Probable receptor-like protein kinase At5g59700 OS... [more]
Y4391_ARATH7.560e-2639.62Probable receptor-like protein kinase At4g39110 OS... [more]
Y2214_ARATH8.358e-2538.54Probable receptor-like protein kinase At2g21480 OS... [more]
Y1357_ARATH2.973e-2231.40Probable receptor-like protein kinase At1g30570 OS... [more]
Y2232_ARATH2.205e-1728.71Probable receptor-like protein kinase At2g23200 OS... [more]
Y2393_ARATH7.092e-1629.29Probable receptor-like protein kinase At2g39360 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-400 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503912 ID=CF503912; Name=CF503912; organism=Citrus sinensis; type=EST; length=727bp
CTCAGTTCTTCAACTAGCTTTTGTTTGTATCTAATGGAGAATCTGCGCAA
AAACCAAGCTTTGTTTCTCTTATTACTGTCTCTATCATCTTTCTATGGTA
TTGCTCTCTCTTTCTCTCCAGCCGATGACTACCTCATTGACTGCGGTTCC
ACCGTGGACACCACCGTAGACAATCGCCTCTTCATTTCCGACTCCTCCCG
CGCCAGCTCGCATCTCTTGACCTTCTCAACTCGGTCAAAATCGATCCAAC
TTAGTCACCGAAATGGTAAATTACCTGAAATTTATAACTCAGCAAGGGTT
TTCGATAGACCATCGAGGTATATTTTCAAGATCAGAGACAAGGGAACCCA
CATGGTACGCCTACACTTCTATCAATTAAATTCGTCTCAATTTGTTTCAG
ATGATGCTCAATTTCACGTTTTGGTTAATGGATATGTTGTTTTGAGCAAT
TTTAGTGTTGGTAATATAATTGCAAGTGCTAGTGTTAAGGAGTATCTTAT
CTGGATTAATGCTGAAAAGCTTGTAATTGCGTTTTTGCCCACTATGAAAT
CGAAATTTGCATTTGTTAATGCCATTGAAGAGATATCCGCACCTAAAGAT
TTGATTTTGGATACTGCCAAGTTTGTCAATGGCGATAAAATAGACAACTT
TGATGCGCTAAGTAAACAAGCGCTTGAAGTTATGTATAGGGTCAATGTGG
GTGGTCCAAAGTGACACCATTTAATGA
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