CF503913 | Citrus Genome Database

Overview


Name	CF503913
Unique Name	CF503913
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	735

Libraries


Library Name	Type
Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9350	contig	Csv1_Contig9350:5..742.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 2.765e-99
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            MAF KAQK+KAYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGEDYSVEPADTRRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAG+++
Sbjct:    1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAK 184

HSP 2 Score: 51.2174 bits (121), Expect = 2.765e-99
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM TLMEDEPEKYQSHF+EYIKKG
Sbjct:  206 YMRTLMEDEPEKYQSHFSEYIKKG 229

HSP 3 Score: 43.8986 bits (102), Expect = 2.765e-99
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVAA 663
            + K+G+QLD EVHRKYI+GGHVAA
Sbjct:  182 YAKNGQQLDVEVHRKYIFGGHVAA 205

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 305.449 bits (781), Expect = 2.442e-94
Identity = 150/184 (81.52%), Postives = 163/184 (88.59%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF +
Sbjct:    1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHK 184

HSP 2 Score: 43.1282 bits (100), Expect = 2.442e-94
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVA 660
            F K+ KQLDAE+HR YIYGGHV+
Sbjct:  182 FHKENKQLDAEIHRNYIYGGHVS 204

HSP 3 Score: 39.6614 bits (91), Expect = 2.442e-94
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM  L EDEPEK Q+HF+ YIKKG
Sbjct:  206 YMKLLGEDEPEKLQTHFSAYIKKG 229

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 3.183e-94
Identity = 150/184 (81.52%), Postives = 163/184 (88.59%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF +
Sbjct:    1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHK 184

HSP 2 Score: 43.1282 bits (100), Expect = 3.183e-94
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVA 660
            F K+ KQLDAE+HR YIYGGHV+
Sbjct:  182 FHKENKQLDAEIHRNYIYGGHVS 204

HSP 3 Score: 39.6614 bits (91), Expect = 3.183e-94
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM  L EDEPEK Q+HF+ YIKKG
Sbjct:  206 YMKLLGEDEPEKLQTHFSAYIKKG 229

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 6.347e-92
Identity = 145/182 (79.67%), Postives = 156/182 (85.71%), Query Frame = 2

Query:   56 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            FVK QK+ AY+KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF +
Sbjct:    4 FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKK 185

HSP 2 Score: 43.8986 bits (102), Expect = 6.347e-92
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVA 660
            F KD KQLD+++HRKYIYGGHVA
Sbjct:  183 FKKDEKQLDSDIHRKYIYGGHVA 205

HSP 3 Score: 41.5874 bits (96), Expect = 6.347e-92
Identity = 15/24 (62.50%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM ++ E+EPEK+Q+HF+EY+KKG
Sbjct:  207 YMRSMAEEEPEKFQAHFSEYLKKG 230

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.830e-91
Identity = 145/182 (79.67%), Postives = 155/182 (85.16%), Query Frame = 2

Query:   56 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            FVK QK+ AY KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF +
Sbjct:    4 FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKK 185

HSP 2 Score: 43.8986 bits (102), Expect = 1.830e-91
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVA 660
            F KD KQLD+++HRKYIYGGHVA
Sbjct:  183 FKKDEKQLDSDIHRKYIYGGHVA 205

HSP 3 Score: 41.5874 bits (96), Expect = 1.830e-91
Identity = 15/24 (62.50%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM ++ E+EPEK+Q+HF+EY+KKG
Sbjct:  207 YMRSMAEEEPEKFQAHFSEYLKKG 230

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 3.030e-88
Identity = 143/182 (78.57%), Postives = 152/182 (83.52%), Query Frame = 2

Query:   56 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSR 601
            FVK QK+ AYFKRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV   TNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D EYEGNVEATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF +
Sbjct:    7 FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKK 185

HSP 2 Score: 43.8986 bits (102), Expect = 3.030e-88
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 1

Query:  592 FFKDGKQLDAEVHRKYIYGGHVA 660
            F KD KQLD+++HRKYIYGGHVA
Sbjct:  183 FKKDEKQLDSDIHRKYIYGGHVA 205

HSP 3 Score: 41.5874 bits (96), Expect = 3.030e-88
Identity = 15/24 (62.50%), Postives = 22/24 (91.67%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM ++ E+EPEK+Q+HF+EY+KKG
Sbjct:  207 YMRSMAEEEPEKFQAHFSEYLKKG 230

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 4.554e-69
Identity = 122/188 (64.89%), Postives = 141/188 (75.00%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVE-PADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSRMAS 610
            M FVK  K+KAYFKR+QVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG++VGLTNYAAAYCTGLLLARR+L  L + D+Y G  +  GED++VE   D  RPFRA LDVGL +TTTGNRVF            IPHS  RF G+   +S
Sbjct:    1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESS 188

HSP 2 Score: 33.4982 bits (75), Expect = 4.554e-69
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM  L E++ EKY++HF+ +IK+G
Sbjct:  207 YMKYLQEEDEEKYKAHFSRFIKEG 230

HSP 3 Score: 27.7202 bits (60), Expect = 4.554e-69
Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = 1

Query:  598 KDGKQLDAEVHRKYIYGGHVA 660
            ++  QL+A+  R+YI+GGHV+
Sbjct:  185 EESSQLEADKLRQYIFGGHVS 205

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 231.876 bits (590), Expect = 5.051e-64
Identity = 116/183 (63.39%), Postives = 136/183 (74.32%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGF 595
            M FVK  K+KAYFKR+QVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI+ QI  A I GD V+ AAYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L    +D+ YEG  E  G+++ VE  D +   FRA LDVGL +TTTG +VF            IPHS KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGY 183

HSP 2 Score: 27.7202 bits (60), Expect = 5.051e-64
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1

Query:  619 AEVHRKYIYGGHVA 660
            AEVHR +I+GGHV+
Sbjct:  192 AEVHRSHIFGGHVS 205

HSP 3 Score: 26.9498 bits (58), Expect = 5.051e-64
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIKKG 734
            YM  L E++ E ++  F++YIK G
Sbjct:  207 YMKELEEEDEEAFKRQFSQYIKHG 230

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 1.115e-63
Identity = 115/183 (62.84%), Postives = 135/183 (73.77%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGF 595
            M FVK  K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183

HSP 2 Score: 27.7202 bits (60), Expect = 1.115e-63
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIK 728
            YM  LME++ + Y+  F++YIK
Sbjct:  207 YMRYLMEEDEDAYKKQFSQYIK 228

HSP 3 Score: 27.335 bits (59), Expect = 1.115e-63
Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 1

Query:  601 DGKQLDAEVHRKYIYGGHVA 660
            + K+ +AEVHRK+I G +VA
Sbjct:  186 ESKEFNAEVHRKHIMGQNVA 205

[Close]

BLAST of CF503913 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.451e-63
Identity = 114/183 (62.30%), Postives = 135/183 (73.77%), Query Frame = 2

Query:   50 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGF 595
            M FVK  K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+VE  D +   F   LD GL +TTTGN+VF            IPHS KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183

HSP 2 Score: 27.7202 bits (60), Expect = 1.451e-63
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 3

Query:  663 YMSTLMEDEPEKYQSHFTEYIK 728
            YM  LME++ + Y+  F++YIK
Sbjct:  207 YMRYLMEEDEDAYKKQFSQYIK 228

HSP 3 Score: 27.335 bits (59), Expect = 1.451e-63
Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 1

Query:  601 DGKQLDAEVHRKYIYGGHVA 660
            + K+ +AEVHRK+I G +VA
Sbjct:  186 ESKEFNAEVHRKHIMGQNVA 205

The following BLAST results are available for this feature:

BLAST of CF503913 vs. ExPASy Swiss-Prot

BLAST of CF503913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77


Match Name	E-value	Identity	Description
RL5_CUCSA	2.765e-99	83.15	60S ribosomal protein L5 OS=Cucumis sativus GN=RPL...	[more]
RL52_ARATH	2.442e-94	81.52	60S ribosomal protein L5-2 OS=Arabidopsis thaliana...	[more]
RL51_ARATH	3.183e-94	81.52	60S ribosomal protein L5-1 OS=Arabidopsis thaliana...	[more]
RL51_ORYSI	6.347e-92	79.67	60S ribosomal protein L5-1 OS=Oryza sativa subsp. ...	[more]
RL51_ORYSJ	1.830e-91	79.67	60S ribosomal protein L5-1 OS=Oryza sativa subsp. ...	[more]
RL52_ORYSJ	3.030e-88	78.57	60S ribosomal protein L5-2 OS=Oryza sativa subsp. ...	[more]
RL5_SUBDO	4.554e-69	64.89	60S ribosomal protein L5 OS=Suberites domuncula GN...	[more]
RL5_STYCL	5.051e-64	63.39	60S ribosomal protein L5 OS=Styela clava GN=RPL5 P...	[more]
RL5_HUMAN	1.115e-63	62.84	60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 P...	[more]
RL5_CHICK	1.451e-63	62.30	60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 ...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_119000-401 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B12 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF503913 ID=CF503913; Name=CF503913; organism=Citrus sinensis; type=EST; length=735bp
GCCGTCTCTCCTTCCCTCTCCTTTCTCTTACAACTCGAAAGTTCGAGCAA
TGGCCTTTGTCAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGGTTCCAG
GTTAAGTACAAGAGAAGAAGAGAGGGAAAGACTGATTACAGAGCTAGAAT
TCGCTTGATTAATCAGGACAAGAATAAGTACAACACACCCAAATACCGAT
TTGTTGTCCGATTCACAAACAAGGACATCATTGCACAGATAGTGTCAGCC
AACATTGTTGGTGATTCTGTCCTTGCTGCTGCTTATGCCCATGAGCTTCC
TCGTTATGGACTTGAAGTAGGTCTTACAAACTATGCTGCAGCTTATTGCA
CTGGGCTTCTTTTGGCTCGTCGTGTCTTGAAGATGCTTGAAATGGATGAT
GAGTATGAGGGCAATGTTGAGGCTACCGGAGAGGATTACTCTGTCGAACC
AGCTGATACAAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGGCTCATCA
AAACAACAACTGGAAACCGTGTCTTTGGTGCTCTGAAGGGAGCATTAGAT
GGTGGATTGGACATTCCTCATAGTGACAAGAGGTTTGCTGGTTTTTCAAG
GATGGCAAGCAGCTGGATGCTGAGGTTCACCGCAAGTATATCTATGGTGG
ACATGTTGCTGCTACATGAGTACATTGATGGAGGATGAGCCAGAGAAGTA
TCAATCTCACTTCACCGAGTACATCAAGAAAGGAA