CF503915

Overview
NameCF503915
Unique NameCF503915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length380
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.478e-49
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 3
Query:  108 DLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            DLEPV    ++YLGRPWK++SRTVVMQS++  HIDP+GW EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVIT+P EA  FTVAEL
Sbjct:  434 DLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAEL 524          

HSP 2 Score: 58.5362 bits (140), Expect = 1.478e-49
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            KP  +Q NMVTAQGRTDPNQ TGTSIQ CD+IAS
Sbjct:  399 KPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIAS 432          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.725e-48
Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            ++DLEPV+ + +SYLGRPWKEYSRTVVM+S+I D IDPAGW EW  DFALKTL+YGEY N GPG+GTS+RVKWPGYHVIT+PE A++FTVAEL
Sbjct:  433 SADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAEL 525          

HSP 2 Score: 55.0694 bits (131), Expect = 2.725e-48
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            K M  Q N +TAQGRTDPNQNTGTSIQ C++ AS
Sbjct:  400 KQMKGQENTITAQGRTDPNQNTGTSIQNCEIFAS 433          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 155.221 bits (391), Expect = 1.025e-47
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            +SDLEPV     +YLGRPWKEYSRTVVM+S++G  I+PAGW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVIT+P +A  FTVA+L
Sbjct:  434 SSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKL 526          

HSP 2 Score: 54.6842 bits (130), Expect = 1.025e-47
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            KP   Q NMVTAQGRTDPNQ TGTSIQ C++IAS
Sbjct:  401 KPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIAS 434          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.741e-47
Identity = 67/91 (73.63%), Postives = 79/91 (86.81%), Query Frame = 3
Query:  108 DLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            DL+PV     +YLGRPWK+YSRTVVM+S++G  IDP+GW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVIT+P EA  FTVA+L
Sbjct:  440 DLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKL 530          

HSP 2 Score: 56.6102 bits (135), Expect = 1.741e-47
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            KP   Q NMVTAQGRTDPNQ TGTSIQ CD+IAS
Sbjct:  405 KPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIAS 438          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.854e-47
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            +SDLEPV     +YLGRPWK+YSRTVVM+S++G  I+PAGW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYH IT+P EA  FTVA+L
Sbjct:  438 SSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKL 530          

HSP 2 Score: 54.6842 bits (130), Expect = 3.854e-47
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            KP   Q NMVTAQGRTDPNQ TGTSIQ C++IAS
Sbjct:  405 KPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIAS 438          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 6.057e-38
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 3
Query:   69 GLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            G   +N T   A DL     ++++YLGRPWKEYSRTV MQS+I   ++P GW EW+GDFAL TLYY EY N GPG+ T+ RV WPGYHVI N  +A  FTV  L
Sbjct:  457 GTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVI-NSTDAANFTVTGL 559          

HSP 2 Score: 51.9878 bits (123), Expect = 6.057e-38
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            KPM  Q N +TAQGR+DPNQNTGTSIQ C +
Sbjct:  435 KPMPNQFNAITAQGRSDPNQNTGTSIQNCTI 465          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.112e-36
Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            ASDL+PV+ S++++LGRPWK+YSRTV +++ +   I+PAGW EWSGDFAL TLYY EY+N GPG+ T+ RVKW GYHV+T+P +  +FTV
Sbjct:  400 ASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTV 489          

HSP 2 Score: 39.2762 bits (90), Expect = 1.112e-36
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:   17 QSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            ++N +TAQGRTDPNQ+TG  I  C V A+
Sbjct:  372 RTNTLTAQGRTDPNQSTGIIIHNCRVTAA 400          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.428e-36
Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            A DL     ++++YLGRPWKEYSRTVVMQ++I   ++P+GW+ WSGDFAL TLYY EY N GPG+ T+ RV WPGYHVI N  +A  FTV
Sbjct:  449 ADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTV 537          

HSP 2 Score: 47.7506 bits (112), Expect = 5.428e-36
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            +P   QSN VTAQGRTDPNQNTGT+I  C +
Sbjct:  416 QPRKGQSNEVTAQGRTDPNQNTGTAIHGCTI 446          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.122e-36
Identity = 58/90 (64.44%), Postives = 66/90 (73.33%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            A+DL PV  S ++YLGRPWKEYSRTV + S +   IDPAGW EWSGDFAL TLYY EY N GPG+ T+ RV WPGY V TN  E  +FTV
Sbjct:  210 AADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTV 299          

HSP 2 Score: 45.8246 bits (107), Expect = 7.122e-36
Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            KP   Q N+ TAQGR DPNQNTG SI  C V A+
Sbjct:  177 KPNENQKNIFTAQGRDDPNQNTGISILNCKVAAA 210          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 9.207e-36
Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = 3
Query:   69 GLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            G+   N T   A DL     ++++YLGRPWKEYSRTV MQS+I + ++P GW EW+GDFAL TLYY EY N G G+ T+ RV WPGYHVI N  +A  FTV
Sbjct:  451 GISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVI-NSTDANNFTV 550          

HSP 2 Score: 48.1358 bits (113), Expect = 9.207e-36
Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            +PM  Q N +TAQGRTDPNQNTG SI  C +
Sbjct:  429 QPMQNQFNAITAQGRTDPNQNTGISIHNCTI 459          
The following BLAST results are available for this feature:
BLAST of CF503915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PME3_SOLLC1.478e-4975.82Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME1_FICAW2.725e-4875.27Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME1_SOLLC1.025e-4774.19Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME21_SOLLC1.741e-4773.63Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME22_SOLLC3.854e-4773.12Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME7_ARATH6.057e-3856.73Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME2_CITSI1.112e-3661.11Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME20_ARATH5.428e-3661.11Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_ACTDE7.122e-3664.44Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME41_ARATH9.207e-3656.44Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-403 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503915 ID=CF503915; Name=CF503915; organism=Citrus sinensis; type=EST; length=380bp
AAAGCCCATGAGCAAGCAATCCAACATGGTCACAGCCCAAGGACGGACTG
ACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGACGTCATAGCA
AGCCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTGGGCC
GGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACATCGGG
GATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTGCACT
GAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCTGGGA
CTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAAACCCAGAA
GAAGCAAAAAAATTTACAGTAGCTGAGCTT
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