CF503950

Overview
NameCF503950
Unique NameCF503950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_SCHPO (Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe GN=nog2 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.969e-53
Identity = 100/176 (56.82%), Postives = 125/176 (71.02%), Query Frame = 2
Query:    2 PFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            PF++ FGPK +RKRPK+       L K +D  Q+A+E+K +    A   E D      R  +F KGQSKRIW ELYKVIDSSDV++QVLDARDP GTRC  +ER+L+    HKHMIL+LNK DLVP      W+++L+KEYP++AFHASIN SFGKGSL+ +LRQFA L SDK+ I
Sbjct:  136 PFENTFGPKSQRKRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAIFSKGQSKRIWNELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAAWVKILAKEYPTIAFHASINNSFGKGSLIQILRQFASLHSDKKQI 311          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.473e-52
Identity = 98/175 (56.00%), Postives = 129/175 (73.71%), Query Frame = 2
Query:    5 FQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D     E     G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +LK+    KH+I +LNKCDLVP WATK W+ VLS++YP+LAFHAS+   FGKG+ + +LRQF +L +DK+ I
Sbjct:  140 FETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDT---GVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQI 311          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.924e-52
Identity = 98/175 (56.00%), Postives = 130/175 (74.29%), Query Frame = 2
Query:    5 FQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D       +E  G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +LK+    KH+I +LNKCDLVP WATK W+ VLS++YP+LAFHAS+   FGKG+ + +LRQF +L +DK+ I
Sbjct:  140 FESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLV---MEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQI 311          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_YEAST (Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae GN=NOG2 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.379e-50
Identity = 98/180 (54.44%), Postives = 127/180 (70.56%), Query Frame = 2
Query:    5 FQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKN--DASTSAEGVEGD---GFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            + DAFGPK +RKRP+L AS+ E LVK  +     +E+K   DA+    G + D   G+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH+I +LNKCDLVP W    W++ LSKE P+LAFHASI  SFGKGSL+ +LRQF++L +D++ I
Sbjct:  137 YADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQI 316          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_YARLI (Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica GN=NOG2 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.012e-50
Identity = 93/175 (53.14%), Postives = 122/175 (69.71%), Query Frame = 2
Query:    5 FQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            + + FGPK +RK+P+L   D+  L   AD SQ  FE K +   S +    DG+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E+++K+   HKH+I +LNKCDLVP W    W++ LS++YP+LAFHASI  SFGKGSL+ +LRQ++ L  D+Q I
Sbjct:  137 YANTFGPKAQRKKPQLAVGDFAELASAADESQQDFEAKKEEDNSWKV---DGWSQEAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWVAAAWVKHLSQDYPTLAFHASITNSFGKGSLIQLLRQYSALHPDRQQI 308          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_ASHGO (Nucleolar GTP-binding protein 2 OS=Ashbya gossypii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.012e-50
Identity = 92/180 (51.11%), Postives = 124/180 (68.89%), Query Frame = 2
Query:    2 PFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            P+   FGPK +RK+P++ A+  E L K  D     +E+K +  ++    A   + DG+  + +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH+I +LNKCDLVP W    W++ LSK+ P+LAFHASI  SFGKGSL+ +LRQF++L  D+Q I
Sbjct:  136 PYGATFGPKAQRKKPRVAAASLEDLAKATDSDSQKYEEKKELDSTLGLMAATEQEDGWSQVAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWLAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRQQI 315          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_PNECA (Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.436e-49
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 2
Query:    2 PFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            PF D FG K  RKR KL AS  E+L   A  S + + +KN    + +      F       +F KG SKRIW ELYK IDSSDV++Q+LDAR+P GTRC H+E +LK+   HKHMILLLNKCDL+P W T+ W++ LSKEYP+LAFHASIN  FGKGSL+ +LRQF++L S+++ I
Sbjct:  123 PFDDTFGKKSXRKRAKLYASSIENLSNFAFESYENYIKKNSEYENVDKNIQKSFE-----AIFSKGTSKRIWNELYKXIDSSDVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQLSKEYPTLAFHASINNPFGKGSLIQLLRQFSKLHSNRRQI 293          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_KLULA (Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis GN=NOG2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.567e-49
Identity = 91/180 (50.56%), Postives = 119/180 (66.11%), Query Frame = 2
Query:    2 PFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            PF+  FGPK +RK+P++ AS  E L+         FE+K +  ++     +  E DG+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +  ++     HKH+I +LNKCDLVP W    W++ LSKE P+LAFHASI  SFGKGSL+ +LRQF++L  D+  I
Sbjct:  136 PFEQTFGPKAQRKKPRIAASSLEELISSTSTDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRHQI 315          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_CANGA (Nucleolar GTP-binding protein 2 OS=Candida glabrata GN=NOG2 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 9.883e-49
Identity = 90/180 (50.00%), Postives = 124/180 (68.89%), Query Frame = 2
Query:    5 FQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSA-----EGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            F   FGPK +RK+P++ AS  E LV+  +     +E+K +   +      +  E +G+  + +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH+I +LNKCDLVP W    W++ LSK+ P+LAFHASI  SFGKGSL+ +LRQF++L +D++ I
Sbjct:  137 FDQTFGPKAQRKKPRVAASSLEELVQATEEENKTYEEKEELKATLGLMGKQEDEENGWTQVTKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQI 316          
BLAST of CF503950 vs. ExPASy Swiss-Prot
Match: NOG2_CRYNV (Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var. grubii GN=NOG2 PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 8.103e-43
Identity = 91/186 (48.92%), Postives = 119/186 (63.98%), Query Frame = 2
Query:    2 PFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLV----------RHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 529
            PF + FGPK +RKRP+L     E L + +  S  A      A T+    +G+G  DL           R  ++ KG S+RIWGELYKV+DSSDVV+ VLDARDP GTRC  +  +L++   HKH++ +LNK DLVP W T  W++ LS   P++AFHASIN SFGKGSL+ +LRQF+ L SDK+ I
Sbjct:  148 PFGNTFGPKAQRKRPRLDIGSIEELGESSAASAAAAA----AETATAESQGNGTADLADIYHPTTSTAREPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQFSVLHSDKKQI 329          
The following BLAST results are available for this feature:
BLAST of CF503950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
NOG2_SCHPO2.969e-5356.82Nucleolar GTP-binding protein 2 OS=Schizosaccharom... [more]
NOG2_HUMAN1.473e-5256.00Nucleolar GTP-binding protein 2 OS=Homo sapiens GN... [more]
NOG2_MOUSE1.924e-5256.00Nucleolar GTP-binding protein 2 OS=Mus musculus GN... [more]
NOG2_YEAST1.379e-5054.44Nucleolar GTP-binding protein 2 OS=Saccharomyces c... [more]
NOG2_YARLI4.012e-5053.14Nucleolar GTP-binding protein 2 OS=Yarrowia lipoly... [more]
NOG2_ASHGO4.012e-5051.11Nucleolar GTP-binding protein 2 OS=Ashbya gossypii... [more]
NOG2_PNECA4.436e-4954.55Nucleolar GTP-binding protein 2 OS=Pneumocystis ca... [more]
NOG2_KLULA7.567e-4950.56Nucleolar GTP-binding protein 2 OS=Kluyveromyces l... [more]
NOG2_CANGA9.883e-4950.00Nucleolar GTP-binding protein 2 OS=Candida glabrat... [more]
NOG2_CRYNV8.103e-4348.92Nucleolar GTP-binding protein 2 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-438 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503950 ID=CF503950; Name=CF503950; organism=Citrus sinensis; type=EST; length=530bp
GCCTTTTCAAGATGCCTTTGGACCTAAGGGAAAGAGGAAGAGGCCAAAGC
TATTGGCATCAGATTACGAATCTTTAGTTAAGAGAGCTGATGGTTCTCAA
GATGCCTTTGAGCAGAAGAATGATGCTAGTACATCAGCAGAAGGAGTTGA
GGGAGATGGATTTAGGGATCTTGTTCGGCATACAATGTTTGAGAAGGGTC
AAAGTAAACGTATATGGGGAGAACTGTACAAAGTAATAGACTCGTCGGAT
GTTGTTGTCCAGGTTTTGGATGCTAGAGACCCTCAAGGCACAAGATGTCA
TCATCTTGAGAGGCATCTAAAAGAGCATTGCAAACATAAGCACATGATTC
TTCTGTTAAACAAGTGCGATCTTGTTCCCGCCTGGGCTACAAAAGGATGG
CTTAGAGTTTTATCAAAGGAATATCCAAGTTTAGCATTCCATGCTAGCAT
CAATAAATCTTTTGGCAAGGGTTCTCTTTTATCTGTGCTGAGACAATTTG
CTCGCTTGAAGAGTGACAAGCAAGCAATAT
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