CF503956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.432e-69 Identity = 120/191 (62.83%), Postives = 153/191 (80.10%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHR-EDARRKRVVEE 571 +++ GVLK+ADFGLA + H++P+TSRVVTLWYR PELLLGATDYG +DLWS GC+ AELL G+PI+ GRTEVEQLHKI+KLCGSP +DYWKK K H ++KP++PY S+RETFKD P +++ LI+ LLS+EP R TASAAL SE+F+++PYAC+ + LP YPPSKEIDAK R E+ RR+R + Sbjct: 250 IDDGGVLKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEDYWKKGKFTHGAIYKPREPYKRSIRETFKDFPPSSLPLIDALLSIEPEDRQTASAALKSEFFTSEPYACEPADLPKYPPSKEIDAKRRDEETRRQRAASK 440
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica GN=CDKC-2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50 Identity = 102/204 (50.00%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQERLHENP 610 ++NEG LKLADFGLA ++ H LT+RV+TLWYRPPELLLG+T YGP+VD+WSVGC+FAELL GKPIL G+ E EQL KIF+LCG+P + W +K+P FKPQ+P ++E+FK A++L+E +L+++P +R +A AL +EYF T P CD SLP Y S E K + +R+ E RQ+ H P Sbjct: 172 IDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAELLNGKPILTGKNEPEQLSKIFELCGTPDELIWPGVTKMPWYNNFKPQRPMKRRVKESFKHFDQHALDLLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQ---AEEAAKRQKLQHPPP 372
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.808e-49 Identity = 101/206 (49.03%), Postives = 135/206 (65.53%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQERLHENPME 616 ++NEG LKLADFGLA + H LT+RV+TLWYRPPELLLGAT YGP++D+WSVGC+FAELL KPIL G+ E EQL+KIF+LCGSP + W SK+P FKP +P +RE F+ A+ L+E +L ++P +R +A AL +EYF T P CD SLP Y S E K + +R+ EE ++++L P++ Sbjct: 172 IDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNEQEQLNKIFELCGSPDEKLWPGVSKMPWFNNFKPARPLKRRVREFFRHFDRHALELLEKMLVLDPAQRISAKDALDAEYFWTDPLPCDPKSLPTYESSHEFQTKKKRQQQRQN--EE--AAKRQKLQHPPLQ 373
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48 Identity = 98/197 (49.75%), Postives = 129/197 (65.48%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAK-------HREDARRKRVVE 568 ++NEG LKLADFGLA + H LT+RV+TLWYRPPELLLGAT YGP++D+WSVGC+FAELL GKPIL G+TE EQL+KI++LCGSP + W SK+P K +P +RE ++ A+ L+E +L ++P +R A AL +EYF T P CD SLP Y S E K H E+A +K+ ++ Sbjct: 172 IDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLNGKPILPGKTENEQLNKIYELCGSPDESNWPGVSKMPWYNQMKSSRPLKRRVREIYRHFDRHALELLEKMLVLDPSQRICAKDALDAEYFWTDPLPCDPKSLPTYESSHEFQTKKKRQQMRHNEEAAKKQKLQ 368
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47 Identity = 97/204 (47.55%), Postives = 130/204 (63.73%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQERLHENP 610 ++NEG LKLADFGLA + H LT+RV+TLWYRPPELLLG+T YGP+VD+WSVGC+FAELL GKPIL G+ E EQL KIF +CG+P + W +K+P FKP + ++E FK A++L+E +L+++P +R +A AL +EYF + P CD SLP Y S E K + R+ + RQ+ H P Sbjct: 172 IDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNEPEQLSKIFDVCGTPDESNWPGVTKMPWYNNFKPPRQLKRRVKEYFKHFDRLALDLLEKMLTLDPAQRISAQDALDAEYFWSDPLPCDPKSLPKYESSHEFQTKKKRQQMRQ---ADEAAKRQKTQHPQP 372
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-STKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQER 595 +NN G +KLADFGLA ++ +P T++V+TLWYRPPELLLG Y P++D+WS GC+ EL KPI Q E+ QL I ++CGSP W KLP+ KP++ Y LRE F +P A++L + +L+++P KR TA AL E+ +P LP++ E+ +K R ++ + ++ ++ R Sbjct: 845 LNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDDLSTIKAPR 1044
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 80/192 (41.67%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA-CDLSSLPIYPPSKEIDAKHREDARRKRVVEE 571 +NN G +KLADFGLA N+ +P T++V+TLWYRPPELLLG Y P++D+WS GC+ EL KPI Q E+ QL I +LCGSP W KLP+ KP++ Y LRE F +P+ A++L++ +L+++P KR TA L S++ + LP + E+ +K R R+ VV E Sbjct: 867 LNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCHELWSKKRRRQRQSGVVVE 1058
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36 Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-STKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQER 595 +NN G +KLADFGLA ++ +P T++V+TLWYRPPELLLG Y P++D+WS GC+ EL KPI Q E+ QL I ++CGSP W KLP+ KP++ Y LRE F +P A++L + +L+++P KR TA AL E+ +P LP++ E+ +K R ++ + ++ ++ R Sbjct: 845 LNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDDVSTIKAPR 1044
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36 Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA-CDLSSLPIYPPSKEIDAKHREDARRKRVVEE 571 +NN G +KLADFGLA N+ +P T++V+TLWYRPPELLLG Y P++D+WS GC+ EL KPI Q E+ QL I +LCGSP W KLP+ KP++ Y LRE F +P+ A++L++ +L+++P KR TA L S++ + LP + E+ +K R R+ +V E Sbjct: 863 LNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCHELWSKKRRRQRQSGIVIE 1054
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36 Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA-CDLSSLPIYPPSKEIDAKHREDARRKRVVEE 571 +NN G +KLADFGLA N+ +P T++V+TLWYRPPELLLG Y P++D+WS GC+ EL KPI Q E+ QL I +LCGSP W KLP+ KP++ Y LRE F +P+ A++L++ +L+++P KR TA L S++ + LP + E+ +K R R+ +V E Sbjct: 863 LNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCHELWSKKRRRQRQSGIVIE 1054 The following BLAST results are available for this feature:
BLAST of CF503956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503956 ID=CF503956; Name=CF503956; organism=Citrus sinensis; type=EST; length=721bpback to top |