CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig511 contig Csv1_Contig511:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.590e-73
Identity = 139/233 (59.66%), Postives = 173/233 (74.25%), Query Frame = 1
Query:    1 LDRSTERWESLARRVFDIYIQGTLRWKDFDISKEAGGPN-RAIIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMR--RKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            L  ++  W+ L RR FDIY+QG L  KDFD+ + AG    RA+ + + A VSENHLE+HLFWAGKGTCC+P QG YGP ISA+S    F P+V+  PPS    KN TG IVG+ V +G+L ++A  ++F +R  RK+  DDEE+L G+D KP  F+Y+EL+SATQDFDPSNKLGEGG+GPVYKG L+DGRV+AVK LS+ S QGK QFV EI  IS+V HRNLV+LYGCC EG
Sbjct:  531 LGSTSTTWKGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQRVYKANVSENHLEVHLFWAGKGTCCIPIQGAYGPLISAVSATPDFTPTVANKPPSKG--KNRTGTIVGVIVGVGLLSILAGVVMFTIRKRRKRYTDDEELL-GMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEG 760          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 6.041e-73
Identity = 138/233 (59.23%), Postives = 170/233 (72.96%), Query Frame = 1
Query:    1 LDRSTERWESLARRVFDIYIQGTLRWKDFDISKEAGGPN-RAIIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMR--RKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            L  ++  W  L RR FDIY+QG L  KDFD+ + AG    RA+ + + A VS+NHLEIHLFWAGKGTCC+P QG YGP ISA+     F P+V   PPS    K+ TG IVG+ V +G+L +I+  ++F +R  RK+  DDEE+L  +D KP TF+Y+EL+SATQDFDPSNKLGEGG+GPVYKG L+DGR +AVK LS+ S QGK QFV EI  ISAVQHRNLV+LYGCC EG
Sbjct:  530 LGSTSNTWRGLGRRRFDIYVQGRLVEKDFDVRRTAGDSTVRAVQREYKANVSQNHLEIHLFWAGKGTCCIPIQGAYGPLISAVGATPDFTPTVGNRPPSKG--KSMTGTIVGVIVGVGLLSIISGVVIFIIRKRRKRYTDDEEIL-SMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEG 759          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.310e-51
Identity = 105/226 (46.46%), Postives = 150/226 (66.37%), Query Frame = 1
Query:   16 ERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAT-VSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            + + SL RR+FDIY+QG L  +DF+I++ AGG  +  I+  +   V+ + LEIHL W GKGT  +P +G YGP ISA+++   FK   +G P S   N    G+++      G+L L+ + +  Y+  K+ +++EE L G+D +  +F+  +++ AT +FDP NK+GEGG+GPVYKG L+DG  IAVKQLS  S QG  +FV EI  ISA+QH NLV+LYGCCIEG
Sbjct:  515 QTFNSLGRRIFDIYVQGNLLERDFNIAERAGGVGKPFIRQIDGVQVNGSTLEIHLQWTGKGTNVIPTRGVYGPLISAITITPNFKVD-TGKPLS---NGAVAGIVIAACAVFGLLVLVILRLTGYLGGKEVDENEE-LRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEG 735          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.710e-51
Identity = 106/226 (46.90%), Postives = 151/226 (66.81%), Query Frame = 1
Query:   16 ERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAT-VSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            + + SL RR+FDIY+QG L  +DF+I++ AGG  +  ++  +   V+ + LEIHL W GKGT  +P +G YGP ISA++V   FK   +G P S   N    G+++   V  G+L L+ + +  Y+  K+ +++EE L G+D +  +F+  +++ AT +FDP NK+GEGG+GPVYKG L+DG  IAVKQLS  S QG  +FV EI  ISA+QH NLV+LYGCCIEG
Sbjct:  513 QTYSSLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWTGKGTNVIPTRGVYGPLISAITVTPNFKVD-TGKPLS---NGVVAGIVIAACVAFGLLVLVILRLTGYLGGKEVDENEE-LRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEG 733          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.502e-50
Identity = 106/221 (47.96%), Postives = 146/221 (66.06%), Query Frame = 1
Query:   28 SLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            SL +R+FDIY+Q  L  K+F+I + A G  + IIK+F   V+++ L+I L WAGKGT  +P +G YGP ISA+SV   FKP V         +     L VG+ V    L L  I  VF+ +R+  ND ++ L G+D +  TF+  ++++AT +FD + K+GEGG+G VYKG LS+G++IAVKQLS  S QG  +FVNEI  ISA+QH NLV+LYGCC+EG
Sbjct:  531 SLGKRLFDIYVQDQLVIKNFNIQEAARGSGKPIIKSFLVNVTDHTLKIGLRWAGKGTTGIPIRGVYGPMISAISVEPNFKPPVYY-------DTKDIILKVGVPVAAATLLLFIIVGVFWKKRRDKNDIDKELRGLDLQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEG 744          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.712e-47
Identity = 105/234 (44.87%), Postives = 142/234 (60.68%), Query Frame = 1
Query:   22 WESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVF-------YMRRK----KDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            ++SL RR FDIYIQ  L  KDF+I+KEA      +IK F   + +  LEI L+WAG+GT  +PK+  YGP ISA+SV S+  PS          N   TG +  + V   IL +  + +VF       Y+R K    KD    E+++       +FS  +++ AT +FD +N++GEGG+GPVYKG L DG +IAVKQLS  S QG  +F+NEI  ISA+ H NLV+LYGCC+EG
Sbjct:  474 YQSLGRRFFDIYIQRKLEVKDFNIAKEAKDVGNVVIKTFPVEIKDGKLEIRLYWAGRGTTVIPKERVYGPLISAISVDSSVNPSPR--------NGMSTGTLHTLVV---ILSIFIVFLVFGTLWKKGYLRSKSQMEKDFKSLELMIA------SFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEG 690          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.329e-45
Identity = 107/229 (46.72%), Postives = 142/229 (62.01%), Query Frame = 1
Query:   16 ERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVP---LGILGLIAIS--IVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            E +  L RR+FDIYIQ  L  KDF+I  EA G    IIK   A V+ + L I L WAGKGT  +P +G YGP ISA+S+VS  KP      P T G      + +GI  P   + ILG + I   +    R++KD  +EE+  G      TF+  +++ AT DF+P+NK+GEGG+G V+KG L+DGRV+AVKQLS  S QG  +F+NEI  IS +QH NLV+L+G C+E
Sbjct:  528 ENYNRLGRRLFDIYIQEKLVAKDFNIMDEAKGAQTPIIKPLTAYVTNHFLTIRLSWAGKGTTRIPTRGVYGPIISAISIVSDSKPCER---PKT-GMSPGAYIAIGIGAPCLIIFILGFLWICGCLPRCGRQRKDPYEEELPSG------TFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVE 746          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  265 KPSVSGLPPSTAGNKNHT--GLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNT----FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            +P VS +PP  +   N T  G+IV I VP+ ++ +  + ++   RRKK     EV    D    T    FS+  + +AT  F  SN +G GG+G VY+G LS G  +AVK+LS  S QG  +F NE   +S +QH+NLVRL G C+EG
Sbjct:  265 QPPVSLIPPPVSDRANTTIKGIIVAIVVPIIVILVSLVVLLVVCRRKKSYKTTEVQA-TDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEG 411          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22
Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  268 PSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNT------FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            P  S   P   GN +   +I+ + VP+ +L L+ +++     + K   +E+  V  D    T      F +  + +AT  F P NKLG+GG+G VYKGTLS G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLV+L G C+EG
Sbjct:  248 PQDSSPRPGKGGNSSV--IIIAVVVPITVLFLLLVAVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEG 392          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22
Identity = 59/146 (40.41%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  268 PSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRK--KDNDDEEVLVGID---SKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            P VS  PP +  + N   L++ I VP+ +  L+ I+   ++ R+  K         G D   +      Y  +++AT DF  SNK+G+GG+G VYKGTLSDG  +AVK+LS +S QG+ +F NE+  ++ +QHRNLVRL G C++G
Sbjct:  259 PPVSA-PPRSGKDGNSKVLVIAIVVPIIVAVLLFIAGYCFLTRRARKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDG 403          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
Y1561_ARATH1.590e-7359.66Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH6.041e-7359.23Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.310e-5146.46Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.710e-5146.90Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH5.502e-5047.96Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH9.712e-4744.87Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH5.329e-4546.72Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH2.845e-2241.22Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH6.339e-2238.78Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK10_ARATH6.339e-2240.41Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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