CF503976

Overview
NameCF503976
Unique NameCF503976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6290 contig Csv1_Contig6290:19..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 1
Query:   79 PLLGISSNS-EPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGV-SSKDGVRRLALVGDDEP 621
            PLL  + ++  PV DI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG++G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+   + G RRLAL   D+P
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 1
Query:  103 SEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIG-VSSKDGVRRLAL 603
            + PV D  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G++G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  S  DG  RLAL
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: SPI7_SOLTU (Serine protease inhibitor 7 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13
Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 1
Query:   85 LGISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSSKDGVRRLALVGDD 615
            + + S++ PV D+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG  G   +    +WFKI K+  F Y    N+++CP +  +SCP     + C K+GV  ++G RRLALV D+
Sbjct:   27 INLPSDATPVLDVAGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQFGY----NLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.427e-13
Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   91 ISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSSKDGVRRLALVGDD 615
            + S++ PV D+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG  G   +    +WFKI K+    Y    N+++CP    S  + C+K+GV  ++G RRLALV ++
Sbjct:    1 LPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALVNEN 177          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.427e-13
Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  106 EPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGIEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPRRCNKIGV-SSKDGVRRLALVGD 612
            +P+ DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS   +    CN + +   K  +RRL L  D
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13
Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   85 LGISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSSKDGVRRLALVGDD 615
            + + S++ PV D+ G ++ S L Y++I    GA G   +LG    ++  C   V + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG  G   +    +WFKI K+    Y    N+++CP +  +SCP     + C K+GV  ++G RRLALV D+
Sbjct:   27 INLPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: SPI6_SOLTU (Probable serine protease inhibitor 6 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12
Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   85 LGISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSSKDGVRRLALVGDD 615
            + + S++ PV D+ G ++   L Y +I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG  G   +    +WFKI ++  F Y    N+++CP +  +SCP     + C K+GV  ++G RRLALV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYHIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVQSSQFGY----NLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12
Identity = 57/184 (30.98%), Postives = 86/184 (46.74%), Query Frame = 1
Query:   97 SNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG-TNGQ-CPLDVIQLSSPSERGDNLRLL-PYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWK-VDSYDDPLIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSSKDGVRRLALVGDDEPALNVL 636
            S++E V+DI G  V    EY ++  + GAGG     G T G  CP+ +IQ  S  + G  +R   P ++   +   T++ + F   V    C E   W  V    +  +  GG E HP  E +  +FKIEK G+ +    Y +V CP    S    C+ IG+ + +G R L L   D+    V+
Sbjct:    1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF---VEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGSLA----YKLVFCPK---SSSGSCSDIGI-NYEGRRSLVLKSSDDSPFRVV 173          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 1
Query:   85 LGISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTD--VNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSSKDGVRRLALVGDD 615
            + + S++ PV D+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +   ++    +     +N++F +  +VK C    +WKV  YD  L    + TGG  G   +    +WFKI K+    Y    N+++CP    S  + C K+GV  ++G RRLALV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPFS--SDDQFCLKVGVVHQNGKRRLALVKDN 203          
BLAST of CF503976 vs. ExPASy Swiss-Prot
Match: CPI1_SOLTU (Cysteine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 61/178 (34.27%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  112 VFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGTNGQCPLDVIQ-LSSPSERGDN-----LRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPLIVTGGIEGHPGAETLLNWFKIEKAGNFSYGG---VYNIVHCPSVCLSCPRRCNKIGVSSKDGVRRLALVGDDE 618
            V+D  GN ++    Y +   L GAG    +   N QCP  V+Q +S P   G+      +R    D   +V+V T V ++F VK + K C ++ +WKV+  D+ L+VTGG  G+       + FKI K    + GG   VY ++HCPS        C  IG + K+G  RL  V DD+
Sbjct:   48 VYDQDGNPLRIGERYIINNPLLGAGAVYLYNIGNLQCPNAVLQHMSIPQFLGEGTPVVFVRKSESDYGDVVRVMTVVYIKFFVKTT-KLCVDQTVWKVN--DEQLVVTGGKVGNEN-----DIFKIMKTDLVTPGGSKYVYKLLHCPSHL-----GCKNIGGNFKNGYPRLVTVDDDK 212          
The following BLAST results are available for this feature:
BLAST of CF503976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MIRA_RICDU1.051e-2236.92Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.373e-2237.7121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPI7_SOLTU1.987e-1329.90Serine protease inhibitor 7 OS=Solanum tuberosum P... [more]
SPI2_SOLTU4.427e-1329.03Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
LSPI_CARPA4.427e-1332.40Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPI1_SOLTU7.552e-1329.90Serine protease inhibitor 1 OS=Solanum tuberosum P... [more]
SPI6_SOLTU4.895e-1228.87Probable serine protease inhibitor 6 OS=Solanum tu... [more]
DRTI_DELRE4.895e-1230.98Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI5_SOLTU2.429e-1129.26Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
CPI1_SOLTU2.429e-1134.27Cysteine protease inhibitor 1 OS=Solanum tuberosum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-464 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503976 ID=CF503976; Name=CF503976; organism=Citrus sinensis; type=EST; length=638bp
CAGCCTTCCAGTGGCAAAAAAATGAAGACTTCATTGATAACAACACTCTC
CTTCCTTATCCTTACCTTGGCCACGCAGCCTCTATTGGGCATCTCATCAA
ACTCTGAACCTGTCTTTGATATCATTGGCAACAAGGTCAAATCCACCCTC
GAGTATAAACTTATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACA
CCTAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTC
CTAGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAATTACAAA
ATTGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTC
TGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGCTATGACG
ATCCATTAATTGTAACCGGCGGAATTGAGGGCCACCCAGGAGCTGAAACG
TTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGG
TGTATACAATATTGTCCATTGTCCGAGTGTCTGTCTTTCTTGTCCTAGAC
GCTGCAACAAAATTGGCGTTTCTTCTAAGGATGGCGTTCGACGTCTGGCT
CTAGTTGGTGATGATGAACCGGCTTTGAATGTTCTGTT
back to top