CF503985
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 419.083 bits (1076), Expect = 9.474e-117 Identity = 203/211 (96.21%), Postives = 207/211 (98.10%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR Sbjct: 148 NFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVR 358
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 413.69 bits (1062), Expect = 3.980e-115 Identity = 198/211 (93.84%), Postives = 207/211 (98.10%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT++DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR Sbjct: 139 NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVR 349
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 5.199e-115 Identity = 199/211 (94.31%), Postives = 206/211 (97.63%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR Sbjct: 148 NFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVR 358
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 6.355e-113 Identity = 195/211 (92.42%), Postives = 204/211 (96.68%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPT+EDRIG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRARVYDDEVR Sbjct: 145 NFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 355
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 6.355e-113 Identity = 193/211 (91.47%), Postives = 205/211 (97.16%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT++DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR Sbjct: 138 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 348
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.084e-112 Identity = 198/211 (93.84%), Postives = 205/211 (97.16%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR Sbjct: 148 NFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 358
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 3.154e-112 Identity = 198/211 (93.84%), Postives = 203/211 (96.21%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR Sbjct: 136 NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 345
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 402.134 bits (1032), Expect = 1.198e-111 Identity = 194/211 (91.94%), Postives = 202/211 (95.73%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT++DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR Sbjct: 150 NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVR 360
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 402.134 bits (1032), Expect = 1.198e-111 Identity = 194/211 (91.94%), Postives = 201/211 (95.26%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR Sbjct: 148 NFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358
BLAST of CF503985 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 2.044e-111 Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 2 Query: 2 NFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKEDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVR 634 NF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+EDRIGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRARVYDDEVR Sbjct: 147 NFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVR 357 The following BLAST results are available for this feature:
BLAST of CF503985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503985 ID=CF503985; Name=CF503985; organism=Citrus sinensis; type=EST; length=635bpback to top |