CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.055e-42
Identity = 77/189 (40.74%), Postives = 126/189 (66.67%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF  M  +D++SW T++  +S+     EAL++F+ + EE+ FSP++ T++ VL +CA L   D GR++H    + G  +D+ + ++L+DMYAKCG +  A M+F+ I++ D VSWT +I+GY  HG  + A+ LF +M Q G++ + ++F+ +L+ACSH GLV+EG   F  M+ +  + P +EHYACI
Sbjct:  454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642          

HSP 2 Score: 121.324 bits (303), Expect = 3.286e-27
Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE 522
            VFD M ERD++SW +++  +      E+ L++F QM       +  TI SV   CA    +  GR VHS+  K     + R  + LLDMY+KCG++  A  +F  +S+   VS+T++I+GYA+ GL+  A++LF  ME+ G+ P+  T   VL  C+   L++EG    + ++E
Sbjct:  252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425          

HSP 3 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFR-RMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF  M +R +VS+T+++  +++     EA+ +F +M EE  SP+ +T+++VL  CA    LD G++VH    +  L  D  + +AL+DMYAKCG++ EA ++F  +   D +SW  II GY+++  +  AL LF   +E+    P+  T  CVL AC+     ++G
Sbjct:  353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518          

HSP 4 Score: 80.4925 bits (197), Expect = 6.427e-15
Identity = 41/165 (24.85%), Postives = 80/165 (48.48%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD +     + W  L+   ++  ++  ++ +F +M       + +T S V  S + L  +  G Q+H    K+G      + ++L+  Y K   +  A  +F+ ++  D +SW +II+GY  +GL+E  L +F +M   G++ +  T + V   C+   L+  G
Sbjct:  151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.794e-41
Identity = 77/188 (40.96%), Postives = 120/188 (63.83%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD   E+ + SW  +++ ++Q    E+A+++F +M++ EFSPN  TI+ +L +CA L  L  G+ VH L   T  ++   + +AL+ MYAKCG+I+EA  +F+ ++  + V+W  +ISGY  HG  + AL +F  M   G+ P  VTFLCVL+ACSH GLV+EG   F  M  ++G  P ++HYAC+
Sbjct:  376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563          

HSP 2 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 47/159 (29.56%), Postives = 84/159 (52.83%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VFDRM E+D + W T+++ + +   + E++ +F  +  E  +  +  T+  +L + A L  L  G Q+HSL  KTG  +   + +  + +Y+KCG I     +F     PD V++ A+I GY  +G +E +L LF+ +   G +  S T + ++    H
Sbjct:  176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334          

HSP 3 Score: 87.4261 bits (215), Expect = 5.258e-17
Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F    + D+V++  ++  ++   E E +L++F ++          T+ S LV  +G   L +   +H  C K+   +   + +AL  +Y+K   I  A  +F+        SW A+ISGY Q+GL+E+A+ LFR M++    PN VT  C+L AC+  G +  G
Sbjct:  278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS-LVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41
Identity = 76/188 (40.43%), Postives = 120/188 (63.83%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M  R++V+WT L+  + Q   +++ + +F +M + + +PN+ T+SSVL +CA +  L  GR+VH    K  ++ +    + L+D+Y KCG + EA+++FER+   +  +WTA+I+G+A HG + +A  LF  M    V PN VTF+ VL AC+HGGLVEEG   F  M+ +F + P  +HYAC+
Sbjct:  262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449          

HSP 2 Score: 105.916 bits (263), Expect = 1.428e-22
Identity = 55/166 (33.13%), Postives = 92/166 (55.42%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +FD   ++D+V+WT ++    +     EA+  F +M++   + N+ T+ SVL +   +  + FGR VH L  +TG +  D  I S+L+DMY KC    +A  +F+ + + + V+WTA+I+GY Q    +  + +F  M +  V PN  T   VL AC+H G +  G
Sbjct:  160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF +  +    SW  +++++     W +A+ ++ QM      P+  T +SVL +C+ L  L+ G+Q+H    ++ L+TD+ + SALLDMY+KCGN  EA  IF  I   D VSWT +IS Y  HG    AL  F  M++ G+KP+ VT L VL AC H GL++EGL  F QM+ K+G+ P++EHY+C+
Sbjct:  366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553          

HSP 2 Score: 124.405 bits (311), Expect = 3.881e-28
Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD M ERD+ SW T+++   Q  E E+AL +F +M    F PN  +++  + +C+ L +L+ G+++H  C K G + D+ + SAL+DMY KC  +  A  +F+++     V+W ++I GY   G S++ +++  RM   G +P+  T   +L ACS
Sbjct:  164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320          

HSP 3 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 48/165 (29.09%), Postives = 91/165 (55.15%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF +M  + +V+W +++  +    + +  + I ++M  E   P+Q T++S+L++C+    L  G+ +H    ++ ++ D  +  +L+D+Y KCG  + A  +F +       SW  +IS Y   G    A++++ +M  +GVKP+ VTF  VL ACS    +E+G
Sbjct:  265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG 429          

HSP 4 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 1
Query:    1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF+    R D+  W +L++ +S+ S + + L +F ++       P+ FT  +V+ +   L     GR +H+L  K+G   D  + S+L+ MYAK      ++ +F+ +   D  SW  +IS + Q G +E AL+LF RME  G +PNSV+    + ACS    +E G
Sbjct:   61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41
Identity = 78/188 (41.49%), Postives = 121/188 (64.36%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M   D + W +++   +Q S  + AL +F +M+   F   Q T++SVL +C GL  L+ G Q H    K   D D  + +AL+DMY KCG++ +A+ +F ++   D ++W+ +ISG AQ+G S+ AL+LF RM+  G KPN +T + VLFACSH GL+E+G ++F+ M++ +G+ PV EHY C+
Sbjct:  216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401          

HSP 2 Score: 123.635 bits (309), Expect = 6.620e-28
Identity = 62/166 (37.35%), Postives = 104/166 (62.65%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            +FD+M +R+++SWTT+++A+S+C   ++AL +   M  +   PN +T SSVL SC G+  +   R +H    K GL++D  + SAL+D++AK G   +A+ +F+ +   D + W +II G+AQ+  S+ AL+LF+RM++ G      T   VL AC+   L+E G+
Sbjct:  118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.906e-41
Identity = 78/187 (41.71%), Postives = 117/187 (62.57%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYAC 561
            VFD M +RD  +W  ++ A+ +     EAL +F+QM+++   P+  ++ S+L  CA L  L +GRQVH+   +   D D  + S L+ MY KCG + +A ++F+R S+ D + W +IISGYA HGL E AL++F  M   G  PN VT + +L ACS+ G +EEGL  F+ M+ KF + P +EHY+C
Sbjct:  287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.163e-40
Identity = 76/188 (40.43%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F +M E++ +SWTT+++ + Q    +EAL +F +M+  +  P+  ++++ L +CA L  L+ G+ +HS   KT +  D  +   L+DMYAKCG + EA+ +F+ I      +WTA+ISGYA HG    A+  F  M+++G+KPN +TF  VL ACS+ GLVEEG   F  M+  + L P +EHY CI
Sbjct:  203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390          

HSP 2 Score: 92.4337 bits (228), Expect = 1.634e-18
Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519
            VFD     D   W  ++   S   E E +L ++ +M       N +T  S+L +C+ L   +   Q+H+   K G + D    ++L++ YA  GN   A ++F+RI  PD VSW ++I GY + G  + AL LFR+M     + N++++  ++       + +E L  F +MQ
Sbjct:   71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM----AEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.163e-40
Identity = 77/188 (40.96%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  M  RD++SW+T++  + Q    EE    FS MR+    P  F ++S+L     +  ++ GRQVH+L    GL+ +  + S+L++MY+KCG+I EA MIF      D VS TA+I+GYA+HG S+ A+ LF +  ++G +P+SVTF+ VL AC+H G ++ G H+F  MQE + + P  EHY C+
Sbjct:  367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCM 554          

HSP 2 Score: 115.161 bits (287), Expect = 2.355e-25
Identity = 54/165 (32.73%), Postives = 91/165 (55.15%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F+ M ERD+VSWT+L+ A+ +  +  +A+  F +MR  +  PN+ T +S+  +CA L  L +G Q+H      GL+    + ++++ MY+ CGN+  A ++F+ +   D +SW+ II GY Q G  E   + F  M Q G KP       +L    +  ++E G
Sbjct:  266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430          

HSP 3 Score: 102.064 bits (253), Expect = 2.063e-21
Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF  M  R+ V+WT ++T       ++E L  FS+M   E   + +T +  L +CAGL  + +G+ +H+     G  T   + ++L  MY +CG + + + +FE +S  D VSWT++I  Y + G    A++ F +M    V PN  TF  +  AC+
Sbjct:  165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321          

HSP 4 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR--EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD+M   D+VSWT+++  +   +  +EAL +FS MR  +   SP+   +S VL +C     + +G  +H+   KT L +   + S+LLDMY + G I ++  +F  +   + V+WTAII+G    G  +  L  F  M +     ++ TF   L AC+
Sbjct:   62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.984e-40
Identity = 85/188 (45.21%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF R+  RD +SW +LV  + Q   + EAL +F QM   +  P     SSV+ +CA L  L  G+Q+H    + G  ++  I SAL+DMY+KCGNI  A  IF+R++  D VSWTAII G+A HG    A+ LF  M++ GVKPN V F+ VL ACSH GLV+E   +F  M + +GL   +EHYA +
Sbjct:  299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486          

HSP 2 Score: 118.627 bits (296), Expect = 2.130e-26
Identity = 57/158 (36.08%), Postives = 97/158 (61.39%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VF+ M  +D+VS+ T++  ++Q   +E+AL +  +M   +  P+ FT+SSVL   +    +  G+++H    + G+D+D  I S+L+DMYAK   I ++  +F R+   D +SW ++++GY Q+G    AL+LFR+M    VKP +V F  V+ AC+H
Sbjct:  198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.984e-40
Identity = 76/194 (39.18%), Postives = 118/194 (60.82%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVH------SLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F +M ER++VSW  L+  ++Q  E EEAL++F  ++ E   P  ++ +++L +CA L  L  G Q H         F++G + D  + ++L+DMY KCG + E  ++F ++   D VSW A+I G+AQ+G    AL+LFR M + G KP+ +T + VL AC H G VEEG H+F  M   FG+ P+ +HY C+
Sbjct:  342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCM 535          

HSP 2 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 62/165 (37.58%), Postives = 105/165 (63.64%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F  M ERD  +W ++V+  +Q    EEAL  F+ M +E F  N+++ +SVL +C+GL  ++ G QVHSL  K+   +D  I SAL+DMY+KCGN+++A  +F+ + + + VSW ++I+ + Q+G +  AL +F+ M +  V+P+ VT   V+ AC+    ++ G
Sbjct:  108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272          

HSP 3 Score: 107.457 bits (267), Expect = 4.910e-23
Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFE-------------------------------RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD MG+R++VSW +L+T   Q     EAL +F  M E    P++ T++SV+ +CA L  +  G++VH    K   L  D  + +A +DMYAKC  I EA  IF+                               +++  + VSW A+I+GY Q+G +E AL LF  +++  V P   +F  +L AC+
Sbjct:  209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP320_ARATH8.055e-4240.74Pentatricopeptide repeat-containing protein At4g18... [more]
PP341_ARATH1.794e-4140.96Pentatricopeptide repeat-containing protein At4g30... [more]
PPR75_ARATH5.221e-4140.43Pentatricopeptide repeat-containing protein At1g50... [more]
PP398_ARATH5.221e-4141.49Pentatricopeptide repeat-containing protein At5g27... [more]
PP147_ARATH5.221e-4141.49Pentatricopeptide repeat-containing protein At2g03... [more]
PPR84_ARATH8.906e-4141.71Pentatricopeptide repeat-containing protein At1g56... [more]
PP449_ARATH1.163e-4040.43Pentatricopeptide repeat-containing protein At5g66... [more]
PP268_ARATH1.163e-4040.96Putative pentatricopeptide repeat-containing prote... [more]
PP251_ARATH1.984e-4045.21Putative pentatricopeptide repeat-containing prote... [more]
PP151_ARATH1.984e-4039.18Pentatricopeptide repeat-containing protein At2g13... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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