CF504013

Overview
NameCF504013
Unique NameCF504013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length348
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504013 vs. ExPASy Swiss-Prot
Match: UBA3_ARATH (NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana GN=ECR1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.941e-11
Identity = 35/54 (64.81%), Postives = 35/54 (64.81%), Query Frame = 3 
Query:    3 FGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTY 164
            FGIPGVTYSLTQGVVK                CALETLKI S CSKTL NYLTY
Sbjct:  267 FGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLKIVSACSKTLVNYLTY 320
The following BLAST results are available for this feature:
BLAST of CF504013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBA3_ARATH1.941e-1164.81NEDD8-activating enzyme E1 catalytic subunit OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-501 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504013 ID=CF504013; Name=CF504013; organism=Citrus sinensis; type=EST; length=348bp
TTTTTGGCATTCCTGGAGTTACATATTCTCTGACTCAGGGTGTTGTGAAA
AACATCATACCAGCTATTGCTTCCACCAATGCAATTATATCAGCAGCATG
TGCTCTTGAAACATTGAAGATTGCATCAGGATGCAGCAAAACTCTATCGA
ATTATCTAACGTATGCCCAGCTTTCTTTTTTTGCATCAGCAATGCAATTC
TTTATGTAGTTACTTTCTTAATATTGGAAGTAAAATGTTAAGGAGAGAGA
TTTTAGGGTTTTGGATTTTTCTCTGTACCTACAAGTGTGCGCTGACTGTA
TTAATTTTTCTTATAAAAAAATATATATTTTTGCAGTTATAATGGTGT
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