CF504014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKJ_DICDI (Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum GN=dhkJ PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 70 ILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHNFDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQLYTAVARF 477 IL+ +DN VN+R+A L+K G V + G AV + FD MD+QMP GF+AT QIR E+E G+ H PI+AMTA + +C++ GMDDY+SKP +QL + ++ Sbjct: 1731 ILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAVAS-SQLRKFDLILMDVQMPHCGGFEATAQIRKREHE-----------------QGI-HTPIIAMTAHALARDRVKCLEAGMDDYISKPINPDQLKAMIEKY 1847
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKL_DICDI (Hybrid signal transduction histidine kinase L OS=Dictyostelium discoideum GN=dhkL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 67 QILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPH--NFDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQLYTAVARF 477 ++LVVDDN +N ++ L+ G V V G A+ K+ ++DA F+D+QMP+MDGFQ + +IR E + + L V I+A TA+V + +C GMDD++SKP + ++ + ++ Sbjct: 1570 KVLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGDSYDAIFLDIQMPDMDGFQVSRKIREREKKFS-----------------LPRVAIIATTANVFKEDQLKCFDAGMDDFISKPIKRAEIKEIIKKY 1691
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: GACS_PSESY (Sensor protein gacS OS=Pseudomonas syringae pv. syringae GN=gacS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 58 KGKQILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHNFDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQLYTAVARF 477 + ++L VDDN N + + L+ GA V V+ G AAV+ + FD MD+QMP MDG QAT IR E E N+ +PI+A+TA + ++ GMDDY++KP + QL V ++ Sbjct: 655 RAPRVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQ-EAFDLVLMDVQMPGMDGRQATEAIRAWEAERNQS-----------------SLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQLAQVVLKW 776
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKI_DICDI (Hybrid signal transduction histidine kinase I OS=Dictyostelium discoideum GN=dhkI-1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13 Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 64 KQILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHN----FDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQLYTAV 468 +++LV +DN +N+++ + L K G +T G+ A+D N +D MD+QMP + G +AT IR +E N G H+PI+A+TA ++ E+ ++ G+DDYV+KP + LY + Sbjct: 1550 QKVLVAEDNTMNQKLIKTLLTKRGFDITIAKDGKQALDFYHESKNKSILYDCILMDIQMPILSGLEATCAIREIE-----------------ANEG-GHIPIIAVTAHAMKGDKEKFLESGVDDYVTKPINPKLLYEVI 1670
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKM_DICDI (Hybrid signal transduction histidine kinase M OS=Dictyostelium discoideum GN=dhkM PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 70 ILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHN-FDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFE 444 IL+V+DN+VN ++A L+KH V G+ A++++ H+ FD MD+ MP MDG + R E E GL H+PI+A+TAD C++ G ++++SKP + Sbjct: 2263 ILLVEDNLVNAKIAMTVLRKHNFRVELSKNGQLAMERIKQSHSSFDLILMDIHMPVMDGITCSKLTRKFETEH-----------------GLKHLPIIALTADATTGHKNLCLEAGCNEFMSKPLD 2371
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKA_DICDI (Hybrid signal transduction histidine kinase A OS=Dictyostelium discoideum GN=dhkA PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 22 QKRKKPSLGHLLKGKQILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHNFDACFMDLQMPEMDGFQATWQIRHLENEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQLYTAVARF 477 Q R P L K+ L+V+DN +NR+V KK ++ + GR A+ ++T FD FMD QMP +DGFQ T IR E E N + + I+A++A + + C+ GMD ++ KP L A+A++ Sbjct: 2011 QGRDTPVLQPPAYRKKALIVEDNELNRKVLAQLFKKIDWTISFAENGREALKEITGERCFDIVFMDCQMPVLDGFQTTKIIRSKERENNWK-----------------RMNIVALSAGSSSSFVQDCLDSGMDSFMGKPITLATLKDALAKW 2145
BLAST of CF504014 vs. ExPASy Swiss-Prot
Match: DHKB_DICDI (Hybrid signal transduction histidine kinase B OS=Dictyostelium discoideum GN=dhkB PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 58 KGKQILVVDDNMVNRRVAEGALKKHGAIVTCVDCGRAAVDKLTPPHNFDACFMDLQMPEMDGFQATWQIRHLE-NEINEQIASGESSAEMFGNVGLWHVPILAMTADVIQASNEQCMKCGMDDYVSKPFEDEQL 456 K ++IL+V+DN VN ++ LK G I G AV+ +D MD QMPEMDGF+AT IR LE + + E S + S HV I+A+TA+ ++C+ GM+D++ KP + + Sbjct: 1837 KIEKILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVE-CVKKGAYDLILMDCQMPEMDGFEATTAIRELEKSNLIESPPSKKHS----------HVVIVALTANSGYKDKQKCLSVGMNDFLQKPIKTSDI 1959 The following BLAST results are available for this feature:
BLAST of CF504014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504014 ID=CF504014; Name=CF504014; organism=Citrus sinensis; type=EST; length=487bpback to top |