CF504030

Overview
NameCF504030
Unique NameCF504030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig514 contig Csv1_Contig514:1..286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.859e-46
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSF LDGIPPAPRGVPQIEVKFDIDANGILSV+A+DKGTGKKQDITITGA
Sbjct:  471 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAIDKGTGKKQDITITGA 565          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.428e-46
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSF LDGIPPAPRGVPQ+EVKFDIDANGILSV+A+DKGTGKKQDITITGA
Sbjct:  351 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQVEVKFDIDANGILSVTAIDKGTGKKQDITITGA 445          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.290e-39
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTT+PT KSEVFSTA DGQT+VEI+VLQGEREF  DNKSLG+F LDGIPPAPRGVPQIEV FDIDANGIL+V+A DKGTGK+Q I+ITGA
Sbjct:  404 KIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREFANDNKSLGTFRLDGIPPAPRGVPQIEVVFDIDANGILNVTAKDKGTGKEQSISITGA 498          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.364e-39
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTT+PT KSEVFSTA DGQT+VEI+VLQGERE   DNKSLG+F LDGIPPAPRGVPQIEV FDIDANGIL+V+A DKGTGK+Q I+ITGA
Sbjct:  404 KIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREMAADNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILNVTARDKGTGKQQSISITGA 498          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNE7 (Chaperone protein dnaK2 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK2 PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 5.421e-38
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            K+IPRNTT+PT KSE FSTAADGQT+VEI+VLQGERE   DNKSLG+F LDGIPPAPRGVPQIEV FDIDANGIL+V+A DKG+GK+Q I+ITGA
Sbjct:  404 KLIPRNTTIPTKKSETFSTAADGQTNVEIHVLQGEREMASDNKSLGTFRLDGIPPAPRGVPQIEVIFDIDANGILNVTAKDKGSGKEQSISITGA 498          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK_GUITH (Chaperone protein dnaK OS=Guillardia theta GN=dnaK PE=3 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 7.080e-38
Identity = 77/95 (81.05%), Postives = 85/95 (89.47%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            +IIPRNTT+PT KSEVFSTA D Q +VEI+VLQGEREF +DNKSLG+F LDGI PAPRGVPQIEV FDIDANGILSV+A DKGTGK+Q ITITGA
Sbjct:  405 RIIPRNTTIPTKKSEVFSTAVDNQPNVEIHVLQGEREFAKDNKSLGTFRLDGILPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEQSITITGA 499          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.247e-38
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTT+PT KSE FSTA DGQ++VEI+VLQGERE   DNKSLG+F LDGIPPAPRGVPQIEV FDIDANGIL+V+A D+GTGK+Q I+ITGA
Sbjct:  405 KIIPRNTTIPTKKSETFSTAVDGQSNVEIHVLQGEREMANDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILNVTAKDRGTGKEQSISITGA 499          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 3.514e-37
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KII RNTT+PT KSE+FSTA DGQT+VEI+VLQGER F +DNKSLG+F LDGI PAPRGVPQIEV FDIDANGILSV+A DKGTGK++ ITITGA
Sbjct:  403 KIIVRNTTIPTQKSELFSTATDGQTNVEIHVLQGERGFAKDNKSLGTFRLDGIAPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEKSITITGA 497          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK_PAVLU (Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.589e-37
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            KIIPRNTT+PT KSE+FSTA D Q +VEI+VLQGEREF RDNKSLG+F LDGI PAPRG+PQIEV FDIDANGILSV+A DKGT K+Q ITI+GA
Sbjct:  404 KIIPRNTTVPTKKSEIFSTAVDNQPNVEIHVLQGEREFARDNKSLGTFRLDGILPAPRGIPQIEVTFDIDANGILSVTAQDKGTSKQQSITISGA 498          
BLAST of CF504030 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNP6 (Chaperone protein dnaK 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.994e-37
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 2
Query:    2 KIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFHLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGA 286
            K+IPRNTT+PT KSE FSTAADGQT+VEI+VLQGERE   DNKSLG+F LDGIPPAPRGVPQIEV F IDANGIL+V+A DKG+GK+Q I+ITGA
Sbjct:  404 KLIPRNTTIPTKKSETFSTAADGQTNVEIHVLQGEREMASDNKSLGTFRLDGIPPAPRGVPQIEVIFVIDANGILNVTAKDKGSGKEQSISITGA 498          
The following BLAST results are available for this feature:
BLAST of CF504030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7S_PEA1.859e-4696.84Stromal 70 kDa heat shock-related protein, chlorop... [more]
HSP7S_SPIOL2.428e-4695.79Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK2_ANASP1.290e-3983.16Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK2_THEEB8.364e-3982.11Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK2_SYNE75.421e-3880.00Chaperone protein dnaK2 OS=Synechococcus elongatus... [more]
DNAK_GUITH7.080e-3881.05Chaperone protein dnaK OS=Guillardia theta GN=dnaK... [more]
DNAK2_SYNY39.247e-3878.95Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_CYAPA3.514e-3780.00Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_PAVLU4.589e-3778.95Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK... [more]
DNAK2_SYNP65.994e-3778.95Chaperone protein dnaK 2 OS=Synechococcus sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-518 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504030 ID=CF504030; Name=CF504030; organism=Citrus sinensis; type=EST; length=286bp
CAAAATTATTCCTAGAAATACAACTTTGCCCACTTCCAAGTCAGAGGTGT
TCTCAACAGCTGCTGATGGTCAGACCAGTGTCGAGATCAATGTTCTCCAA
GGTGAAAGAGAATTCGTGAGGGACAACAAATCTCTTGGCAGCTTCCATCT
TGATGGCATCCCTCCAGCACCGCGTGGGGTTCCTCAAATTGAGGTTAAAT
TTGACATCGATGCCAATGGTATTCTTTCTGTCTCTGCTGTTGACAAAGGC
ACCGGAAAGAAACAAGACATCACCATTACTGGTGCT
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