CF504052

Overview
NameCF504052
Unique NameCF504052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12025 contig Csv1_Contig12025:288..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: Y4UB_RHISN (Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) GN=NGR_a01380 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.282e-39
Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 1
Query:   28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 552
            P ++E  +G  + D  G + +D  AGL+C  +G     +  A + Q   L +YHS+   TT     L+  L++M    KM+KVF+  SGS+AN+TQ KLVWYYNN  G+P KKK I+R++ YHG ++++ S++G+   H   DLP P + HT  PH++  A+PGETE E+S R A
Sbjct:   34 PTIVETGKGIRIQDARGNQLIDGFAGLYCVNVGYGRTEVAEAISRQAYRLAYYHSYAAHTTDELAILSDRLVKM-APGKMSKVFYGMSGSDANETQAKLVWYYNNLRGKPTKKKIISRERGYHGCSVVSGSMTGMSFYHDHMDLPLPQICHTGVPHHYWGANPGETEREFSARRA 207          

HSP 2 Score: 25.7942 bits (55), Expect = 2.282e-39
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  558 LEDLILKEGPETIAAFIAEP 617
            L+++I   GP+ + AFIAEP
Sbjct:  210 LDEMIETLGPDNVGAFIAEP 229          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: YHXA_BACSU (Uncharacterized aminotransferase yhxA OS=Bacillus subtilis GN=yhxA PE=3 SV=4)

HSP 1 Score: 108.227 bits (269), Expect = 3.396e-23
Identity = 60/167 (35.93%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   31 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 531
            L+ +K+EG++V D +G++YLD+++GLWC  +G     L  AA  QL  LP+Y     ++  P++ LA++L E      +  +FF+NSGSEAN+T  K+   Y+   G  ++ KFI+R ++YHG+TL A S +G      K++  +   LH   P  +R     +T E
Sbjct:   36 LIAQKAEGAWVTDTDGRRYLDAMSGLWCVNIGYGRKELAEAAYEQLKELPYYPL--TQSHAPAIQLAEKLNEWLGGDYV--IFFSNSGSEANETAFKIARQYHLQNGDHSRYKFISRYRAYHGNTLGALSATGQAQRKYKYEPLSQGFLHAAPPDIYRNPDDADTLE 198          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: YGD3_SCHPO (Uncharacterized aminotransferase C1771.03c OS=Schizosaccharomyces pombe GN=SPBC1773.03c PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.886e-20
Identity = 57/183 (31.15%), Postives = 91/183 (49.73%), Query Frame = 1
Query:    7 WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 552
            + S +  P  + ++EG Y+Y  +G + +D+  G     LG     ++ A   Q   + + HS    + +P+  LA  LL        A+ +F NSGSEA +T +KL+  Y   +G   +   IAR++ YHG+TL A S+ G+    Q ++ + +    H      +RY   GET EEY  RLA
Sbjct:   21 YTSPNHRPPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQSEKVCYIHSM-GFSNEPADKLAN-LLVSEHPDVFARAYFANSGSEAVETCLKLILQYWQLVGEKQRCHIIARKQGYHGNTLFALSVGGMKPRKQPYEGVFSHTTSHVSPCFEYRYKENGETTEEYVARLA 201          

HSP 2 Score: 31.187 bits (69), Expect = 6.886e-20
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3
Query:  543 QISHNLEDLILKEGPETIAAFIAE 614
            +++  LED IL+ GPE +AAF+AE
Sbjct:  199 RLAKELEDEILRVGPEKVAAFVAE 222          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOK_BACSU (Lysine-8-amino-7-oxononanoate aminotransferase OS=Bacillus subtilis GN=bioK PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 50/164 (30.49%), Postives = 89/164 (54.27%), Query Frame = 1
Query:   19 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTD 486
            D +PL+IE   G  V D+NGK+Y D  + +W    G  +  L  A   QL  +  + +    T  P+  LA+ L+++ +  K+ +VF+++SG+EA +  +K+ + Y   +G+P K+KFIA +  YHG T+ A S+  +        P + + +  P P+V  ++
Sbjct:   24 DENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA-HSTLLGMTNVPATQLAETLIDI-SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSE 185          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOA_BACSH (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Bacillus sphaericus GN=bioA PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.657e-19
Identity = 51/152 (33.55%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 483
            P+VI+K EG ++YD   ++YLD+++  W    G + PR+  A + Q  TL  +  F N + +P++ LA++L+ + T   + KVFF ++GS A +  +K+ + Y+   G+  KK+F+A   +YHG TL A S+ G+   ++ +    P +L T
Sbjct:   31 PIVIKKGEGVWLYDEQNQRYLDAVSSWWVNLFGHANPRISQALSEQAFTLE-HTIFANFSHEPAIKLAQKLVAL-TPQSLQKVFFADNGSSAIEVALKMSFQYHMQTGKTQKKRFLALTDAYHGETLGALSVGGVDLYNEVYQ---PLLLDT 177          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOA_METJA (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Methanocaldococcus jannaschii GN=bioA PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18
Identity = 52/169 (30.77%), Postives = 92/169 (54.44%), Query Frame = 1
Query:   31 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEE 531
            L+IE+ EG+Y+ D+ G KYLD+++ +WC   G S   ++ A   Q + +  + +       PS+ LAK+L+++ T   + KVF++  G+EA +  +K+ + Y    G   + KFI+ ++ YHG T+ A S+ G    H  F        H + P+ +R  Y +  +T+E
Sbjct:   32 LIIERGEGNYLIDIYGNKYLDAVSSIWCNLFGHSRKEIIEAIKNQADKI-CHSTLLGCGNVPSILLAKKLVDI-TPKHLTKVFYSEDGAEAVEIAIKMAYQYYVLRGDKGRTKFISVKEGYHGDTVGAMSVGGSELFHGVFKPLLFKGYHANPPYCYRCKYHNFKDTDE 198          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOA_AQUAE (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Aquifex aeolicus GN=bioA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18
Identity = 48/156 (30.77%), Postives = 88/156 (56.41%), Query Frame = 1
Query:   31 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH--------QKFDLPAPFV 474
            L+ E+ EG Y++D+ G+KY+D+++ LWC   G + P+L  A   QL  +  + +    +  P++ LAK+L+E+ +   + KVF++  G+EA +  +K+ ++Y    G   K  FI   ++YHG T+ A S+ G+   H        +   LP+P++
Sbjct:   33 LIFERGEGVYLWDIYGRKYIDAISSLWCNVHGHNHPKLNNAVMKQLCKVA-HTTTLGSSNVPAILLAKKLVEI-SPEGLNKVFYSEDGAEAVEIAIKMAYHYWKNKGVKGKNVFITLSEAYHGDTVGAVSVGGIELFHGTYKDLLFKTIKLPSPYL 186          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_MYXXA (Acetylornithine aminotransferase OS=Myxococcus xanthus GN=argD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18
Identity = 54/149 (36.24%), Postives = 87/149 (58.39%), Query Frame = 1
Query:   28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD-LPAPF 471
            P V+ + +G+ V+D++G++YLD + G+   ALG   P +VAAA AQL++L  +H      ++P +DLA +L E    S +++ FF NSG+EAN+  +KL        G P + + I+   S+HG TL   + +G     + F+ LPA F
Sbjct:   38 PFVLARGQGARVWDMDGREYLDLIGGIATCALGHCHPEVVAAAKAQLDSL--WHVSNVFYSQPQIDLAAQLTEW---SGLSRAFFCNSGAEANEALLKLTRKVMKDRGTPERFEVISFDSSFHGRTLATVTATGQAKYQKGFEPLPAGF 181          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ASTC_SALPK (Succinylornithine transaminase OS=Salmonella paratyphi A (strain AKU_12601) GN=astC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.132e-17
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 480
            PL+  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q N   F+H+    T +P+L LAK+L++   A+   +VFF NSG+EAN+  +KL   Y +     +K   +A + ++HG TL   S  G P   Q F    P + H
Sbjct:   22 PLIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQANR--FWHTGNGYTNEPALRLAKKLID---ATFAERVFFCNSGAEANEAALKLARKYAHDRVGNHKSGIVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRH 167          
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ASTC_SALPA (Succinylornithine transaminase OS=Salmonella paratyphi A GN=astC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.132e-17
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 480
            PL+  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q N   F+H+    T +P+L LAK+L++   A+   +VFF NSG+EAN+  +KL   Y +     +K   +A + ++HG TL   S  G P   Q F    P + H
Sbjct:   22 PLIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQANR--FWHTGNGYTNEPALRLAKKLID---ATFAERVFFCNSGAEANEAALKLARKYAHDRVGNHKSGIVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRH 167          
The following BLAST results are available for this feature:
BLAST of CF504052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
Y4UB_RHISN2.282e-3941.71Uncharacterized aminotransferase y4uB OS=Rhizobium... [more]
YHXA_BACSU3.396e-2335.93Uncharacterized aminotransferase yhxA OS=Bacillus ... [more]
YGD3_SCHPO6.886e-2031.15Uncharacterized aminotransferase C1771.03c OS=Schi... [more]
BIOK_BACSU3.886e-1930.49Lysine-8-amino-7-oxononanoate aminotransferase OS=... [more]
BIOA_BACSH8.657e-1933.55Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_METJA9.572e-1830.77Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
BIOA_AQUAE9.572e-1830.77Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
ARGD_MYXXA9.572e-1836.24Acetylornithine aminotransferase OS=Myxococcus xan... [more]
ASTC_SALPK2.132e-1735.76Succinylornithine transaminase OS=Salmonella parat... [more]
ASTC_SALPA2.132e-1735.76Succinylornithine transaminase OS=Salmonella parat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504052 ID=CF504052; Name=CF504052; organism=Citrus sinensis; type=EST; length=619bp
GCTGGGTGGCAGAGTACTGATGTGCATCCACTGGTTATAGAAAAGTCTGA
GGGTAGTTATGTTTACGACGTCAATGGGAAGAAGTATCTTGATTCTCTTG
CTGGCCTATGGTGCACAGCACTAGGGGGGAGTGAACCTCGCCTTGTGGCT
GCTGCTACTGCACAATTGAATACCCTGCCATTTTACCACTCCTTCTGGAA
TCGTACCACAAAACCTTCTCTGGATCTTGCAAAGGAGCTTTTAGAAATGT
TTACCGCAAGTAAAATGGCCAAGGTTTTCTTTACTAATAGTGGATCAGAA
GCCAATGACACTCAGGTCAAGCTGGTTTGGTATTACAATAATGCTCTTGG
AAGACCAAACAAAAAGAAATTTATCGCACGACAAAAATCGTACCATGGTT
CAACTTTGATTGCAGCTAGTCTTTCTGGTCTTCCAGCTTTGCACCAAAAA
TTTGATCTGCCGGCTCCCTTCGTATTGCACACTGACTGCCCTCATTATTG
GCGCTACGCTCATCCAGGTGAGACAGAGGAGGAGTATTCAACCAGATTAG
CCACAATTTAGAGGATCTCATTCTCAAAGAGGGACCAGAGACGATTGCTG
CATTTATTGCTGAGCCTGT
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