CF504057
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 7.374e-66 Identity = 114/148 (77.03%), Postives = 130/148 (87.84%), Query Frame = 1 Query: 1 REWTGVCAPAADPKVKSAEEGAEDPNLEEKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRPH 444 REWTGVCAPA +PKV+S + G EDP LEEKR VRE+IQG LT AERK LVE C RN+TKRQ+NLGRDGLTHNMLND++NHWKHAEAVR+KCLGVPT+DMKNV F LEDKTFG+++ +H GTLVLYRGRNY+PKKRP IPLMLW+PH Sbjct: 118 REWTGVCAPAVNPKVESVD-GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPH 264
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 7.391e-58 Identity = 108/153 (70.59%), Postives = 122/153 (79.74%), Query Frame = 1 Query: 1 REWTGVCAPAADPKVKSAEEGAEDP------NLEEKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 R WTG+CAPA D ++ A A+DP LEE R RER+ GEPLT AER LV KC ++RTK+QINLGRDGLTHNMLNDIHNHWK+ EAVR+KCLGVPTVDM+NVC QLEDKT G II RHGG L+LYRGR+YNPKKRPVIPLMLW+P Sbjct: 111 RPWTGLCAPAVDTTLRDAH--ADDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKP 261
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.654e-41 Identity = 81/148 (54.73%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 1 REWTGVCAPAADPKVKSAEEGAEDPNLEEKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRPH 444 R+WTG A A P++ ++ E R R+ GE LT E L+E+ + RQINLG+ G+THNM++DIHNHWK AEAVRIKCLGVPT+DM N+CF LE+K+ GKI++R+ LVLYRGRNY+PK RP+IPLMLW+PH Sbjct: 113 RKWTGTTA-LASPEIDQSQWVEE-----------RARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPH 248
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.822e-41 Identity = 82/147 (55.78%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 1 REWTGVCAPAADPKVKSAEEGAEDPNLEEKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 R W GV A AA + A + RE + GEPL E LVE+ + RQINLG+ G+THNM++DIHNHWK AEAVRIKCLGVPT+DM N+CF LEDKT GK+I+R+ L+LYRGRNY+PK+RP IPLMLW+P Sbjct: 115 RPWDGVAAAAARGEGAGAAATS------------REEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKP 249
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.959e-34 Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 73 PNLEEKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 P + + + +E I GEPLT E + LV C + T RQ+N+GRDGLTHNMLN+IH+ WK +IKC GV TVDM NVC QLE+K GK+I+R GG L L+RGRNYN + RP PLMLW+P Sbjct: 225 PGVGPRYVYSKEEILGEPLTKEEVRELVTSCLK--TTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKP 345
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.363e-34 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 103 RERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 RE + GEPLT AE + LV K H + RQ+N+GRDGLTHNML IH HW+ E +++C GVPTVDMKN+C+ LE+K+ GK+I R GG + LYRGRNYNP+ RP PLMLW+P Sbjct: 222 REEVLGEPLTAAEVRDLV-KPHISHN-RQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKP 332
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.270e-33 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 103 RERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 RE + GEPLT +E +ALV K H + RQ+N+GRDGLTHNML IH HW+ E +++C GVPTVDMKN+C+ LE+K+ GK+I R GG + LYRGR+Y+PK RP PLMLW+P Sbjct: 226 REEVLGEPLTPSEVRALV-KPHISHN-RQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKP 336
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.828e-33 Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 103 RERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 RE + GEPLT E LV+ + TKRQ+N+GRDGLTHNML +IH+HWK +IKC GV TVDM NVC QLE+K GK+I GG + L+RGRNYN + RP+ PLMLW+P Sbjct: 177 REEVLGEPLTKEEVDELVKATLK--TKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKP 287
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.301e-33 Identity = 65/113 (57.52%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 103 RERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 RE I GEPLT E LV+ ++ KRQ+N+GRDGLTHNML +IH+HWK +IKC GV T+DM N+C QLE+K GK+I R GG + L+RGRNYN + RP PLMLW+P Sbjct: 177 REDILGEPLTKEEVSELVKGSLKS--KRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLMLWKP 287
BLAST of CF504057 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.314e-30 Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 103 RERIQGEPLTNAERKALVEK-CHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRP 441 RE + GEPL E+ L++ H NR Q+NLGRDG THNML IH+HWK +++C GVPTVDM NVC LE+KT G+II R GG + L+RGRNYN + RP PLMLW+P Sbjct: 195 REEVLGEPLKRWEKGMLIKPHMHDNR---QVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKP 305 The following BLAST results are available for this feature:
BLAST of CF504057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504057 ID=CF504057; Name=CF504057; organism=Citrus sinensis; type=EST; length=446bpback to top |