CF504064

Overview
NameCF504064
Unique NameCF504064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.284e-46
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 3
Query:  102 QPSLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTANTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGS 446
            Q SLAGS+AMGLLFSLFCIFGLIIV +ET       E+AL+ Y+D  SHS TAN++WK T AREALSINLA FEKPLRKLTFADLLEATNGFHNDSL+GSGGFGDVYKA+LKDGS
Sbjct:  797 QASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKEAALEAYMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGS 911          
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.284e-46
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 3
Query:  102 QPSLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTANTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGS 446
            Q SLAGS+AMGLLFSLFCIFGLIIV +ET       E+AL+ Y+D  SHS TAN++WK T AREALSINLA FEKPLRKLTFADLLEATNGFHNDSL+GSGGFGDVYKA+LKDGS
Sbjct:  797 QASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKEAALEAYMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGS 911          
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.904e-38
Identity = 81/116 (69.83%), Postives = 91/116 (78.45%), Query Frame = 3
Query:  108 SLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTA---NTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGS 446
            SLAGS+AMGLLFS  CIFGLI+V  E        E+ L++Y +   +SG     NT+WKLTG +EALSINLA FEKPLRKLTFADLL+ATNGFHNDSLIGSGGFGDVYKA LKDGS
Sbjct:  791 SLAGSVAMGLLFSFVCIFGLILVGREMRKRRRKKEAELEMYAEGHGNSGDRTANNTNWKLTGVKEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGS 906          
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.595e-31
Identity = 64/113 (56.64%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  108 SLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTANTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGS 446
            S+A  ++ G++FS  CI  LI+ +          E   + YI+S   SG++  SWKL+   E LSIN+ATFEKPLRKLTFA LLEATNGF  DS+IGSGGFGDVYKAKL DGS
Sbjct:  772 SIATGMSAGIVFSFMCIVMLIMALYRARKVQKK-EKQREKYIESLPTSGSS--SWKLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGS 881          

HSP 2 Score: 40.0466 bits (92), Expect = 1.595e-31
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 2
Query:    2 FLNNSGLCGLPLPPCEKDSGASANSRHQKSHRRP 103
            + NNSGLCG+PLPPC      S+ SR  +SH  P
Sbjct:  741 YANNSGLCGVPLPPC------SSGSRPTRSHAHP 768          
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.284e-26
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  108 SLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTANTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGS 446
            ++A ++  G+ FS  C F ++++ +         E   + YI+S   SG+   SWKL+   E LSIN+ATFEKPLRKLTFA LLEATNGF  ++++GSGGFG+VYKA+L+DGS
Sbjct:  773 TVATAVIAGIAFSFMC-FVMLVMALYRVRKVQKKEQKREKYIESLPTSGSC--SWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGS 882          

HSP 2 Score: 31.187 bits (69), Expect = 2.284e-26
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 2
Query:    2 FLNNSGLCGLPLPPC 46
            + NNSGLCG+PL PC
Sbjct:  741 YANNSGLCGVPLRPC 755          
BLAST of CF504064 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.752e-20
Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  108 SLAGSIAMGLLFSLFCIFGLIIVVVETXXXXXXXESALDVYIDSRSHSGTANTSWKLTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGST 449
            S A SI +G+L S   +  LI+  +         + A  ++     +S T   +WK+   +E LSIN+ATF++ LRKL F+ L+EATNGF   S+IG GGFG+V+KA LKDGS+
Sbjct:  752 SWANSIVLGVLISAASVCILIVWAIAVRARRRDADDAKMLHSLQAVNSAT---TWKIEKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSS 862          

HSP 2 Score: 30.0314 bits (66), Expect = 5.752e-20
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:    2 FLNNSGLCGLPLPPCE 49
            + NN GLCG+PLP C+
Sbjct:  713 YANNPGLCGVPLPECK 728          
The following BLAST results are available for this feature:
BLAST of CF504064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BRI1_SOLPE2.284e-4678.26Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC2.284e-4678.26Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_ARATH3.904e-3869.83Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRL3_ARATH1.595e-3156.64Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRL1_ARATH2.284e-2649.56Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL2_ARATH5.752e-2042.98Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-552 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504064 ID=CF504064; Name=CF504064; organism=Citrus sinensis; type=EST; length=449bp
GTTCTTGAACAATTCAGGCCTTTGTGGATTACCTCTTCCTCCTTGTGAAA
AAGATTCAGGGGCGAGTGCTAATTCTCGGCATCAGAAGTCTCATAGGAGA
CCAGCCTTCTCTCGCGGGGAGCATTGCTATGGGATTGTTGTTTTCTCTCT
TCTGCATCTTTGGTTTGATCATAGTTGTTGTGGAAACAAGAAAAAGGAGG
AAAAAGAAAGAATCAGCTCTTGATGTTTATATTGATAGCCGTTCTCATTC
AGGCACTGCAAATACCAGCTGGAAGCTAACGGGAGCACGAGAAGCACTGA
GCATCAACCTTGCCACATTTGAGAAGCCCCTTCGAAAGCTGACCTTTGCA
GATCTCCTTGAAGCCACTAACGGCTTCCACAATGACAGTCTTATAGGCTC
TGGTGGGTTTGGTGATGTATACAAGGCTAAACTGAAAGATGGAAGTACT
back to top