CF504065

Overview
NameCF504065
Unique NameCF504065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:1..366. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.181e-40
Identity = 73/114 (64.04%), Postives = 91/114 (79.82%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            MKIFH+PCL+DNY+YLII+E+T +AAVVDPV+PEK+I +A++              WDHAGGNEKIK++VP IKVYGGSLD VKGCT  V+NGDK ++G  +N+LALHTPCHTK
Sbjct:    1 MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTK 114          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.122e-25
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    3 ALEQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            +L ++  MK+  +P L DNY YL+I+E TKEAA+VDPVEP+K+++A K+              WDHAGGNEK+ +++PG+ VYGG  D V   T +V + + F +G+ +NV  L TPCHT
Sbjct:   37 SLVEQSDMKVELLPALTDNYMYLLIDEETKEAAIVDPVEPQKVVDAVKKHGVKLKTVLTTHHHWDHAGGNEKLVKLMPGLTVYGGD-DRVGALTQKVTHYNTFKVGS-LNVKCLFTPCHT 154          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 6.955e-25
Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YLII+E T+EAA+VDPV+P+K+IEAAK+              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT
Sbjct:   50 MKVELLPALTDNYMYLIIDEDTQEAAIVDPVQPQKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LSVKCLSTPCHT 160          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_CALJA (Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Callithrix jacchus GN=HAGH PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.186e-24
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YL+I++ TKEAA+VDPV+P+K++E AK+              WDHAGGNEK+ ++ PG+KVYGG  D + G TH+  +     +G+ +NV  L TPCHT
Sbjct:   21 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVEEAKKHGVMLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGGLTHKGTHLSTLQVGS-LNVKCLSTPCHT 131          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.024e-24
Identity = 56/117 (47.86%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   12 QRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            Q+  MKI  +P L DNY YLII+E T+EAAVVDPV+P+K+IE  K+              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT
Sbjct:   46 QQDMMKIELLPALTDNYMYLIIDEDTQEAAVVDPVQPQKVIETVKKHRVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLEVGS-LSVKCLSTPCHT 160          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 3.452e-24
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YL+I+E TKEAA+VDPV+P+K++E A++              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT
Sbjct:   49 MKVELLPALTDNYMYLLIDEDTKEAAIVDPVQPQKVVETARKHGVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LHVKCLSTPCHT 159          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  IP L DNY YL+I+E +KEAA+VDPV+P+K+++A K+              WDHAGGNEK+ +MV G+KVYGG    +   T +V +   F +G+ ++V  L+TPCHT
Sbjct:   54 MKVELIPALTDNYMYLLIDEESKEAAIVDPVQPQKVVDAVKKHGVKLTTVLTTHHHWDHAGGNEKLVKMVSGLKVYGGD-SRIGALTQKVSHLTTFQVGS-LHVKCLYTPCHT 164          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YL+I++ TKEAA+VDPV+P+K+++AA++              WDHAGGNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT
Sbjct:   49 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHT 159          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.237e-23
Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YL+I++ TKEAA+VDPV+P+K+++AA++              WDHAGGNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT
Sbjct:   49 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVLDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLQSGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHT 159          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.400e-22
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +P L DNY YL+I+E TKEAA+VDPV+P+K+++A K+              WDHAGGNEK+ ++  G++VYGG    V   T +V +     +G+ +NV  L TPCHT
Sbjct:   51 MKVEVLPALTDNYMYLLIDEETKEAAIVDPVQPQKVLDAVKKHGVKLTSVLTTHHHWDHAGGNEKLVKLETGLRVYGGD-SRVGALTQKVSHLTSLKVGS-LNVKCLCTPCHT 161          
The following BLAST results are available for this feature:
BLAST of CF504065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GLO2C_ARATH1.181e-4064.04Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_DANRE3.122e-2545.83Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MOUSE6.955e-2548.67Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CALJA1.186e-2446.90Hydroxyacylglutathione hydrolase, mitochondrial (F... [more]
GLO2_RAT2.024e-2447.86Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_BOVIN3.452e-2446.02Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR1.713e-2346.02Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_HUMAN1.713e-2344.25Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MACFA2.237e-2344.25Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CHICK9.400e-2244.25Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-553 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504065 ID=CF504065; Name=CF504065; organism=Citrus sinensis; type=EST; length=366bp
GTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGTTTG
GAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGCTGC
AGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAACAAC
ACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGACCAT
GCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGTGTA
TGGGGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATG
GTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGGCTCTTCACACG
CCTTGCCATACCAAAG
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