CF504103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2/beta-3 chain OS=Arabidopsis thaliana GN=TUBB2 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.168e-35 Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+VVCAEHGIDPTG+Y GD+DLQLERINVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.992e-35 Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 1 Query: 76 EILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 EI+HIQGGQCGNQIG+KFW+VVCAEHGIDPTG+Y GDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM Sbjct: 1 EIVHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 71
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.571e-35 Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+VVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGRYVPRA+LMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB8_ARATH (Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 9.888e-35 Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+VVCAEHGID TG+YQG+ DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_ORYSJ (Tubulin beta-2 chain OS=Oryza sativa subsp. japonica GN=TUBB2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.888e-35 Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+VVCAEHGID TG+Y GD+DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_MAIZE (Tubulin beta-1 chain OS=Zea mays GN=TUBB1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.687e-34 Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+VVCAEHGID TG+Y GD+DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYGGDSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.203e-34 Identity = 64/73 (87.67%), Postives = 70/73 (95.89%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+VVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.877e-34 Identity = 63/73 (86.30%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+VVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB5_WHEAT (Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.877e-34 Identity = 64/73 (87.67%), Postives = 70/73 (95.89%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+VVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB5_MAIZE (Tubulin beta-5 chain OS=Zea mays GN=TUBB5 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.877e-34 Identity = 64/73 (87.67%), Postives = 70/73 (95.89%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+VVC EHGIDPTG+Y G +DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM 73 The following BLAST results are available for this feature:
BLAST of CF504103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504103 ID=CF504103; Name=CF504103; organism=Citrus sinensis; type=EST; length=288bpback to top |