CF504130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 2.676e-51 Identity = 102/145 (70.34%), Postives = 124/145 (85.52%), Query Frame = 3 Query: 6 SYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAEDLKI 440 +Y+HRVGRTARAGREGYAVTFVTD+DRSLLKAIAK+AGS+LKSRIVAE+ + + +K+IE++EDQ++ I+Q ILRKAEMEATKAENMIAHK+EI++RPKRTWF TEKEKKL KA K S +GK S + V SAQQAEDL++ Sbjct: 522 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVAECAKLIEELEDQISTIIQEEREERILRKAEMEATKAENMIAHKDEIYSRPKRTWFATEKEKKLLAKAAKESTSQGK-SNSGVISAQQAEDLRL 665
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.124e-49 Identity = 97/145 (66.90%), Postives = 118/145 (81.38%), Query Frame = 3 Query: 6 SYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAEDLKI 440 SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK+ GSKLKSR++ EQSI KWS+II++MEDQ +A++ LRKAEME KAENM+ H++EI+ARPKRTWF+TEKEKKL +A+K S G +G E+ SA +AEDLK+ Sbjct: 495 SYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWFMTEKEKKLVAQAEKDS--AGNPAGGELVSADRAEDLKM 637
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.747e-26 Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI 377 YVHRVGRTARAGR G A+T + DR ++KA K G+K+ SRI+ W I+++ED+V A+++ +L +A+ME K ENMI ++++I ARPKRTWF TEK+KK A +A +A++ Sbjct: 584 YVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISSRIIDAADADSWQAKIDELEDEVEAVMREEKEEKVLAQADMEMRKGENMIRYEDDIKARPKRTWFETEKDKKAAREAGRAAL 709
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.132e-25 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA---KRAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASIE------KGKGSG 398 YVHRVGRTARAGR G A+T + DR ++KA K G+K+ SR++ KW I++M+D++ ILQ L + EM+ K EN+I H+EEI ARPKRTWF T+++KK A + +A + K KG+G Sbjct: 599 YVHRVGRTARAGRSGVAITLAAEPDRKVVKAAVRAGKAQGAKIISRVIDAADADKWQDQIDEMDDEIDEILQEEKEEKQLAQIEMQVKKGENLIKHEEEIHARPKRTWFETQEDKKKAKELGRAELNGVRDAMKKKGAG 737
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.338e-25 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI 377 YVHRVGRTARAGR G A+T + DR ++KA K G+K+ SRI+ KW I+++ED++ I+Q L+ EM+ K ENMI +++EI +RPKRTWF T+++KK A A +A + Sbjct: 622 YVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKSQGAKISSRIIDPADADKWQAEIDELEDEIEEIMQEEKEEKQLQNMEMQVKKGENMIKYEDEISSRPKRTWFETQEDKKKAKAAGRAEL 747
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_ASPOR (ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae GN=drs1 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 2.135e-24 Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI 377 Y+HRVGRTARAGR G A T + DR ++KA K + G+K+ SR+V +W++ + +E+++ A+L+ L +AEM+ T++ENMI H+ EI +RPKRTWF +E+EK L+ KA A + Sbjct: 631 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPAVADRWAQKAKDLEEEINAVLEEEKIEKQLAQAEMQVTRSENMIKHEAEIMSRPKRTWFASEREKILSKKAGAAEL 756
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.212e-24 Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVK 359 Y+HRVGRTARAGR G A T + DR ++KA K + G+K+ SR++ WS+ +++M D++ IL+ IL +AEME K +N I H+ EI RPKRTWF TEKEK A K Sbjct: 597 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGAKVVSRVIEASEADSWSEKVDEMADEIEEILKEEKEDKILAQAEMEVRKGQNFIDHEAEIKGRPKRTWFETEKEKLAAKK 716
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_CRYNE (ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans GN=DRS1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.083e-23 Identity = 52/121 (42.98%), Postives = 81/121 (66.94%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA-GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADK 368 Y HRVGRTARAGR+G +V+ V + DR +LKA K+A +++ RI+ +++T + +E+ +D + IL+ +LR+A+ME K +NM+ H+ EIF+RP RTWF + KEK+ + A K Sbjct: 553 YTHRVGRTARAGRKGRSVSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMKEKLEEFKDDIQEILKEEKEEKLLRQADMEIKKGQNMVEHEAEIFSRPARTWFQSGKEKQASKSAGK 673
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.083e-23 Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI 377 Y+HRVGRTARAGR G A T + DR ++KA K + G+K+ SR+V +W+K +E+++ +L+ L +AEM+ TK EN+I H+ EI +RPKRTWF +EK+K+ A K A + Sbjct: 633 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPAVADQWAKKAADLEEEINEVLEEEKTEKQLAQAEMQVTKGENLIKHEAEIMSRPKRTWFESEKDKRAARKLGAAQL 758
BLAST of CF504130 vs. ExPASy Swiss-Prot
Match: DRS1_ASPNC (ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=drs1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.083e-23 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 9 YVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA---GSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQXXXXXXILRKAEMEATKAENMIAHKEEIFARPKRTWFVTEKEKKLAVKADKASI 377 Y+HRVGRTARAGR G A T + DR ++KA K G+K+ SR++ W+ E++ D+V +L L +AEM+ TK EN+I H+ EI +RPKRTWF TE++KK A K A + Sbjct: 635 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIASRVIEPAVADSWAAKAEELADEVEEVLSEEKLEKQLAQAEMQVTKGENLIKHEAEIKSRPKRTWFETERDKKAARKLGAAEL 760 The following BLAST results are available for this feature:
BLAST of CF504130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504130 ID=CF504130; Name=CF504130; organism=Citrus sinensis; type=EST; length=472bpback to top |