CF504168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB3_ARATH (Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.416e-25 Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 3 Query: 144 MSSSTPAALSPDHLSSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLS--VNMRGLLLPAANQLHLGHPFFTP 383 MSSS+ A PDH SS++QLCYVHC+FCDTVLAVSVP +SLFKTVTVRCGHC+NLLS V+MR LLLP+ + +LGH F P Sbjct: 6 MSSSSAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS--NLGHSFLPP 85
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25 Identity = 59/95 (62.11%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 144 MSSSTPAALSPDHLSS-----------SEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPA----ANQLHLGHPFFTP 383 M SS P S DHLS EQLCYVHC FCDT+LAV VPC+SLFKTVTVRCGHC NLLSVN+RGLLLPA ANQL G +P Sbjct: 1 MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSP 95
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25 Identity = 59/95 (62.11%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 144 MSSSTPAALSPDHLSS-----------SEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPA----ANQLHLGHPFFTP 383 M SS P S DHLS EQLCYVHC FCDT+LAV VPC+SLFKTVTVRCGHC NLLSVN+RGLLLPA ANQL G +P Sbjct: 1 MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSP 95
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25 Identity = 58/87 (66.67%), Postives = 64/87 (73.56%), Query Frame = 3 Query: 147 SSSTPAALSPDHL---SSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPA-----ANQLHLGHPFFTP 383 SSS+ A DHL S +EQLCYVHC CDT+LAV VPC+SLFKTVTVRCGHC NLLSVN+RGLLLPA ANQLH G +P Sbjct: 4 SSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSP 90
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25 Identity = 58/87 (66.67%), Postives = 64/87 (73.56%), Query Frame = 3 Query: 147 SSSTPAALSPDHL---SSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPA-----ANQLHLGHPFFTP 383 SSS+ A DHL S +EQLCYVHC CDT+LAV VPC+SLFKTVTVRCGHC NLLSVN+RGLLLPA ANQLH G +P Sbjct: 4 SSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSP 90
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB1_ARATH (Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.030e-25 Identity = 55/83 (66.27%), Postives = 62/83 (74.70%), Query Frame = 3 Query: 144 MSSSTPAALSPDHLSSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHL---GHPFFTP 383 MSS + A SPDH S S+ LCYV C FC T+LAV+VP TSLFKTVTVRCG CTNLLSVNMR +LPA+NQL L H +F P Sbjct: 6 MSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNP 88
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.764e-19 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 186 SSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLP 341 S EQLCYVHC +CDTVL VSVP +SLF+TVTVRCGHC++LL+VNMRGLLLP Sbjct: 55 SEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLP 106
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.203e-17 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 183 LSSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLL--LPAANQLHLGH 368 ++ +EQ+CYVHC FC+T+LAVSVP S+ VTVRCGHCTNLLSVN+RGL+ PA H H Sbjct: 5 IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHH 68
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.267e-15 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 168 LSPDHLSSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLL--LPAANQL 356 +S + + E +CYVHC FC+T+ AVSVP S+ VTVRCGHCT+LLSVN+RGL+ LPA + L Sbjct: 1 MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHL 65
BLAST of CF504168 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 3 Query: 189 SSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNM 323 SSE++CYVHC+FC T+LAVSVP SLF VTVRCGHCTNLLS+N+ Sbjct: 6 SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNI 50 The following BLAST results are available for this feature:
BLAST of CF504168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504168 ID=CF504168; Name=CF504168; organism=Citrus sinensis; type=EST; length=384bpback to top |