CF504204

Overview
NameCF504204
Unique NameCF504204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length213
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:166..378. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.692e-19
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43
[Close]
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43
The following BLAST results are available for this feature:
BLAST of CF504204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 453
Match NameE-valueIdentityDescription
METK_SOLBR7.421e-19100.00S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK3_PETHY7.421e-19100.00S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK1_SOLTU7.421e-19100.00S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK1_SOLLC7.421e-19100.00S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK3_ARATH9.692e-1997.67S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK4_BRAJU1.266e-1895.35S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_SOLLC1.266e-1895.35S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK3_CATRO1.266e-1895.35S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC1.266e-1895.35S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PETHY1.266e-1895.35S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-692 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504204 ID=CF504204; Name=CF504204; organism=Citrus sinensis; type=EST; length=213bp
GTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAGATCTGC
GCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTC
ACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGG
TTGCCTGTGAGAC
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