CF504205

Overview
NameCF504205
Unique NameCF504205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504205 vs. ExPASy Swiss-Prot
Match: UFSP_ARATH (Probable Ufm1-specific protease OS=Arabidopsis thaliana GN=At3g48380 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.627e-16
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 1
Query:    1 VLCYATKRLPLIYALSKLVVPGLVDQLNTMKKAIMPYLLTQHPQLRPFHFSPPGVLQPI 177
            VL YA K LPL++A+S LV+P LVDQL ++KK I+P+LL +HPQLR +HF+PPGVL PI
Sbjct:  312 VLTYAPKDLPLMHAVSNLVIPALVDQLYSLKKIILPHLLVEHPQLRIYHFNPPGVLHPI 370          
BLAST of CF504205 vs. ExPASy Swiss-Prot
Match: UFSP_ORYSJ (Probable Ufm1-specific protease OS=Oryza sativa subsp. japonica GN=Os12g0285500 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.082e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query:    1 VLCYATKRLPLIYALSKLVVPGLVDQLNTMKKAIMPYLLTQHPQLRPFHFSPPGVLQPI 177
            +LCY +   P+  A+S+LV+PGL DQL+ MKKAI+  L TQ PQL P+HF PPG+L P+
Sbjct:  308 ILCYTSVDFPVAAAVSELVIPGLADQLSIMKKAIVSELTTQQPQLSPYHFVPPGLLIPV 366          
The following BLAST results are available for this feature:
BLAST of CF504205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFSP_ARATH2.627e-1664.41Probable Ufm1-specific protease OS=Arabidopsis tha... [more]
UFSP_ORYSJ2.082e-1355.93Probable Ufm1-specific protease OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-693 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504205 ID=CF504205; Name=CF504205; organism=Citrus sinensis; type=EST; length=178bp
GTGCTTTGTTATGCAACCAAGAGGCTTCCGTTGATATATGCTCTTTCTAA
GTTAGTAGTCCCTGGTTTAGTTGACCAATTAAATACAATGAAGAAGGCAA
TCATGCCCTACCTCCTAACTCAGCATCCTCAGCTGCGACCTTTCCACTTT
AGTCCACCTGGAGTATTGCAACCAATAA
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