CF504206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_MESCR (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.136e-30 Identity = 66/96 (68.75%), Postives = 73/96 (76.04%), Query Frame = 2 Query: 179 STTNTRVFSAPETL----AGXXXXXXXXXXPETLSVSSGADQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 S++N RVF+APE L G L + + +DQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRI+CVLK Sbjct: 53 SSSNVRVFAAPEVLESQETGPESYVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLK 148
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_ARATH (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana GN=RPS10 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.192e-29 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 2 Query: 53 SLSAAISPSLTVPIXXXXXXXXXXXXXPSKNYAG--NTLKLEPLSTTNTRVFSAPETL--AGXXXXXXXXXXPETLSVSSGADQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 ++S+ + PS +P PS + G ++ L S + T+VF+ P+TL P + S+S AD+MAPKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPTKKRIYCVLK Sbjct: 5 TVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLTKVFAVPDTLDPTPEILDEPASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLK 142
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_CYAPA (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa GN=rps10 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.030e-12 Identity = 31/49 (63.27%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 308 KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 KIRI+LRSY L+E+SC+QI++AA+ T+A +GP+PLPTKK+IYCVL+ Sbjct: 8 KIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLR 56
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_PORPU (30S ribosomal protein S10, chloroplastic OS=Porphyra purpurea GN=rps10 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 2 Query: 308 KIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 KIRIKL++Y L+ SCK+I+D A TNA +GP+PLPTK+RIYCVL+ Sbjct: 8 KIRIKLKAYNSSLLNTSCKKIVDTAERTNAIAVGPIPLPTKRRIYCVLR 56
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_GUITH (30S ribosomal protein S10, chloroplastic OS=Guillardia theta GN=rps10 PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 2 Query: 302 KQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 KQKIRI+L+ Y L+ DSC +I++ A TN+ T GP+PLPT+++IYCVL+ Sbjct: 3 KQKIRIRLKGYETNLLLDSCNKIIETATRTNSVTAGPIPLPTRRKIYCVLR 53
BLAST of CF504206 vs. ExPASy Swiss-Prot
Match: RR10_EMIHU (30S ribosomal protein S10, chloroplastic OS=Emiliania huxleyi GN=rps10 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 2 Query: 305 QKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLK 454 QK+RI L++Y L+ DSC QI++A T K +GP+PLPTK+RIYCVL+ Sbjct: 4 QKLRIALKAYETSLLNDSCTQIINAVETGGVKAIGPIPLPTKRRIYCVLR 53 The following BLAST results are available for this feature:
BLAST of CF504206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504206 ID=CF504206; Name=CF504206; organism=Citrus sinensis; type=EST; length=454bpback to top |