CF504223

Overview
NameCF504223
Unique NameCF504223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:527..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.168e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.168e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.168e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.168e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  411 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 499
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.504e-43
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQ KAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.273e-42
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IV+HNTCEDSLLAAPIILDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPE
Sbjct:  415 IVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPE 503
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.273e-42
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEDKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 1.273e-42
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IV+HNTCEDSLLAAPIILDLVLLAELSTRIQ K+EGEGKFHSFHPVATILSYLTKAPLVPPGTPV+NALSKQRAMLENI+RACVGLAPE
Sbjct:  415 IVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPE 503
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 1.663e-42
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPE
Sbjct:  414 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPE 502
[Close]
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.171e-42
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 2 
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            IV+HNTCEDSLLAAPIILDLVLLAELSTRIQ KAEGEGKFHSFHPVATILSYLTKAPLVP GTPVVNALSKQRAMLENILRACVGLAPE
Sbjct:  414 IVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKAEGEGKFHSFHPVATILSYLTKAPLVPAGTPVVNALSKQRAMLENILRACVGLAPE 502
The following BLAST results are available for this feature:
BLAST of CF504223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_TOBAC5.168e-44100.00Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN5.168e-44100.00Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA5.168e-44100.00Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_CITPA5.168e-44100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO2_ARATH1.504e-4398.88Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_PHAVU1.273e-4294.38Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_MAIZE1.273e-4296.63Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ARATH1.273e-4294.38Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_ORYSJ1.663e-4296.63Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_WHEAT2.171e-4296.63Inositol-3-phosphate synthase OS=Triticum aestivum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-712 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504223 ID=CF504223; Name=CF504223; organism=Citrus sinensis; type=EST; length=269bp
CATTGTGCTGCACAACACGTGTGAGGACTCTCTTTTGGCTGCTCCAATCA
TTCTAGATTTGGTTCTGCTGGCTGAACTCAGCACCAGGATCCAGCTCAAA
GCTGAAGGAGAGGGAAAATTCCACTCTTTCCACCCTGTGGCTACAATTCT
CAGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGTGA
ATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTTGC
GTTGGCTTGGCTCCTGAGA
back to top