CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 3.955e-52
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 1
Query:   40 GARVADFGVAKVVDASGK-PKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            GARVADFGVAK VD +GK PKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILE+VT + PVDPE GEKDLVKWVCSTLDQKG++HV+DPKLD CFKEEI K LN+GLLCT
Sbjct:  828 GARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEKDLVKWVCSTLDQKGIEHVIDPKLDSCFKEEISKILNVGLLCT 942          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.358e-41
Identity = 81/116 (69.83%), Postives = 96/116 (82.76%), Query Frame = 1
Query:   40 GARVADFGVAKVVDASGK--PKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            GA+VADFG+AKV   SG   P++MS IAGSCGYIAPEY YTLRVNEKSDIYSFGVV+LELVTG+ P D E G+KD+ KWVC+ LD+ G++ V+DPKLD  FKEEI K ++IGLLCT
Sbjct:  832 GAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVCTALDKCGLEPVIDPKLDLKFKEEISKVIHIGLLCT 947          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.358e-26
Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCSTLDQK-GVDHVLDPKLD---CCFKEEICKGLNIGLLCT 381
            ARVADFGVAK++      +SMSV+AGS GYIAPEYAYTL+V++KSDIYS+GV++LE++TG+  V+PEFGE   +V WV S L  K  V+ VLD  +       +EE+ + L I LLCT
Sbjct:  866 ARVADFGVAKLIQTD---ESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCT 980          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.489e-24
Identity = 56/118 (47.46%), Postives = 83/118 (70.34%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMS--VIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCST---LDQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            R+ADFG+AK++ A    +  S  ++ G+ GYIAPEYAYT +VNEKSD+YSFGVV++ELVTG+ P++ +FGE  D+V WV S     +++ +  ++D  ++  +KE+  K L I LLCT
Sbjct:  829 RIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCT 946          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.715e-21
Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = 1
Query:   46 RVADFGVAKVV---DASG-KPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVC-------------------STLDQKGVDHVLDPKLDCCFK--EEICKGLNIGLLCT 381
            RVADFG+AK +   D  G    SMS +AGS GYIAPEY YT +VNEKSD+YSFGVV+LEL+TG+ P D  FGE KD+VK+                     S  + + +  ++DPK+    +  EEI K L++ LLCT
Sbjct:  832 RVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCT 969          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.372e-20
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCST-------LDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            A VADFG+AK +      + MS IAGS GYIAPEYAYTL+V+EKSD+YSFGVV+LEL+ G+ PV  EFGE  D+V+WV +T        D   V  ++DP+L       +     I ++C
Sbjct:  831 AHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG-EFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMC 949          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.792e-20
Identity = 57/118 (48.31%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL-DQKGVDHVLDPKL----DCCFKEEICKGLNIGLLCT 381
            A V DFG+AKV+D     KS+S +AGS GYIAPEYAYT++V EK DIYSFGVV+LEL+TG+ PV P     DL  W  + + D      +LDP L    D      +     I +LCT
Sbjct:  966 AHVGDFGLAKVIDMP-LSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCT 1082          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.893e-20
Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 1
Query:   43 ARVADFGVAKVV--DASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFG-EKDLVKWVCSTLDQKGV--DHVLDPKLD--CCFKEE-ICKGLNIGLLCT 381
            A + DFG+AKV+  +      S +  A S GYIAPEYAY+L+  EKSD+YS G+V++E+VTG++P D  FG E D+V+WV + L+  G   D ++DPKL     F+E+  C+ L I L CT
Sbjct: 1098 AHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCT 1218          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.161e-19
Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            + DFG+AK+VD     +S + IAGS GYIAPEY Y++++ EKSD+YS+GVV+LE++TG+ P+DP   +   +V WV    D + +D  L  + +    EE+ + L + LLC
Sbjct:  936 IGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVIDQGLQARPE-SEVEEMMQTLGVALLC 1045          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.677e-18
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 1
Query:   43 ARVADFGVAKVVDAS--GKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-DLVKWVCSTLD--------QKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            A + DFG+AK++  +     +S ++ AGS GYIAPEYAY+L+  EKSD+YS G+V++E+VTG++P +  F E+ D+V+WV + LD        +K +D  L   L  C +E   + L I L CT
Sbjct: 1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLP-CEEEAAYQVLEIALQCT 1215          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
HSL1_ARATH3.955e-5286.09Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RLK5_ARATH5.358e-4169.83Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y5148_ARATH6.358e-2655.08Probable leucine-rich repeat receptor-like protein... [more]
IKU2_ARATH3.489e-2447.46Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
HSL2_ARATH4.715e-2146.38LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH1.372e-2048.33Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y2317_ARATH1.792e-2048.31Probable leucine-rich repeat receptor-like protein... [more]
GSO1_ARATH8.893e-2046.28LRR receptor-like serine/threonine-protein kinase ... [more]
RCH1_ARATH1.161e-1943.24LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH1.677e-1841.94LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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