CF504233

Overview
NameCF504233
Unique NameCF504233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:49..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.488e-42
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG
Sbjct:    1 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 79          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.480e-39
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVHE +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHEEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 79          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 9.981e-39
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            MFIE+FKVESPNVKYT+ EIHSVY+YETTELVHE+RNGTYQWIVKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLTG
Sbjct:    1 MFIESFKVESPNVKYTEGEIHSVYNYETTELVHESRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTG 79          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 9.981e-39
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVH+ +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHDEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 79          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.449e-38
Identity = 70/78 (89.74%), Postives = 76/78 (97.44%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.211e-37
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EIHSVYDY+TTELVHEN+NG +QW VKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 5.477e-37
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EI+SVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEINSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 7.908e-36
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHEN NG YQWIVKPK VKY+FKTD  VPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENVNGAYQWIVKPKVVKYDFKTDTRVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.668e-34
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLT 79          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 5.668e-34
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLT 79          
The following BLAST results are available for this feature:
BLAST of CF504233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
INO1_CITPA1.488e-42100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_TOBAC4.480e-3992.41Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN9.981e-3992.41Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA9.981e-3991.14Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_WHEAT8.449e-3889.74Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO3_ARATH3.211e-3788.46Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO2_ARATH5.477e-3788.46Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_BRANA7.908e-3687.18Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU5.668e-3486.08Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH5.668e-3486.08Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-722 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504233 ID=CF504233; Name=CF504233; organism=Citrus sinensis; type=EST; length=490bp
CTAGTTTCGAAAGTTAAAAGAGTGTTGAGTCGAGTGGGAAGTGAGAATTG
AGAAGGAGAGTTGAGTTCGGAGACAGCAAGACGAAACAGCTCTTCTTCCA
ATAAATCTCAAAAGCATTTGTTTGGTTTTATTTAAAGCAATTTTCTCAGC
AAACTCTTCTTCTAATAAATTTTAAAGCATTTGTTTGGTTTTTATTTAAA
GCAATTTTCTCAGCGAAGTTTTCAATTTTTTCTCTAAAATTTTCCTGGGA
AAATGTTTATCGAAAATTTCAAGGTTGAGAGCCCAAATGTGAAGTACACA
GATCATGAGATTCACTCTGTGTACGATTATGAAACCACTGAGCTTGTTCA
TGAGAACAGAAATGGCACTTATCAGTGGATTGTCAAGCCCAAAACTGTCA
AATATGAGTTCAAAACCGATGTTCATGTCCCTAAACTTGGGGTTATGCTT
GTGGGTTGGGGTGGAAACAACGGCTCAACTCTCACGGGTG
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