CF504255

Overview
NameCF504255
Unique NameCF504255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12387 contig Csv1_Contig12387:192..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLCC_ARATH (Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.546e-51
Identity = 95/120 (79.17%), Postives = 100/120 (83.33%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLCLP +I++KIS+G                   YSFTLFCIILPMTMF+PEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT
Sbjct:  457 CELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIKSKISIGKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 576          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSJ (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.190e-50
Identity = 94/120 (78.33%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR KI+                     YSFTLFCIILPMTMFIPEAELP WVVCYIPA MSFLNILPAPKSFPFI+PYLLFENTMSVT
Sbjct:  444 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKIAFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVT 563          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSI (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.190e-50
Identity = 94/120 (78.33%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR KI+                     YSFTLFCIILPMTMFIPEAELP WVVCYIPA MSFLNILPAPKSFPFI+PYLLFENTMSVT
Sbjct:  444 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKIAFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVT 563          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC1_ORYSJ (Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.055e-49
Identity = 92/120 (76.67%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLC  DII++KI +                    YSFTLFCIILPMTMF+PEAELPAWVVCYIPATMS LNILPAPKSFPFIVPYLLFENTMSVT
Sbjct:  449 CELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSKIGVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVT 568          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC7_ORYSJ (Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.545e-48
Identity = 91/120 (75.83%), Postives = 95/120 (79.17%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLC  DII++KI                      YSFTLFC+ILPMTMF+PEAELPAWVVCYIPATMS LNILPAPKSFPFIVPYLLFENTMSVT
Sbjct:  446 CELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSKIGFWKKFNLIFLFFLLRKLILPFYSFTLFCVILPMTMFVPEAELPAWVVCYIPATMSILNILPAPKSFPFIVPYLLFENTMSVT 565          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC9_ORYSJ (Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica GN=CSLC9 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 5.869e-48
Identity = 90/120 (75.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPMQLFRLCLPDII+ KI                      YSFTLFCIILPMTMF+PEAELP WVVCYIPA MS LNILP+PKSFPFI+PYLLFENTMSVT
Sbjct:  354 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKCKIVFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLFENTMSVT 473          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSJ (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. japonica GN=CSLC2 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 2.230e-47
Identity = 86/120 (71.67%), Postives = 94/120 (78.33%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPM LFRLCLPDI+ AKIS                     YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MSFLNILP+P+SFPFIVPYLLFENTMSVT
Sbjct:  449 CELPESYEAYRKQQHRWHSGPMHLFRLCLPDILTAKISSWKKANLILLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVT 568          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSI (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. indica GN=CSLC2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.888e-46
Identity = 85/120 (70.83%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAYRKQQHRWHSGPM LF LCLPDI+ AKIS                     YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MSFLNILP+P+SFPFIVPYLLFENTMSVT
Sbjct:  449 CELPESYEAYRKQQHRWHSGPMHLFWLCLPDILTAKISSWKKANLILLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVT 568          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC4_ARATH (Xyloglucan glycosyltransferase 4 OS=Arabidopsis thaliana GN=CSLC4 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.493e-46
Identity = 83/120 (69.17%), Postives = 95/120 (79.17%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAY+KQQHRWHSGPMQLFRLCLP II++KIS+                    YSFTLFCIILP+TMFIPEAELP W++CY+P  +S LNILP+PKSFPF+VPYLLFENTMS+T
Sbjct:  415 CELPESYEAYKKQQHRWHSGPMQLFRLCLPSIIKSKISVWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWIICYVPIFISLLNILPSPKSFPFLVPYLLFENTMSIT 534          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC3_ORYSJ (Probable xyloglucan glycosyltransferase 3 OS=Oryza sativa subsp. japonica GN=CSLC3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.174e-46
Identity = 82/120 (68.33%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESY+AYRKQQHRWHSGPMQLFRLCLP + ++KIS                     YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MS LNILPAPKSFPF++PYLLFENTMSVT
Sbjct:  477 CELPESYQAYRKQQHRWHSGPMQLFRLCLPAVFKSKISTWKKANLVMLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPIWVICYVPVIMSVLNILPAPKSFPFVIPYLLFENTMSVT 596          
The following BLAST results are available for this feature:
BLAST of CF504255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLCC_ARATH2.546e-5179.17Probable xyloglucan glycosyltransferase 12 OS=Arab... [more]
CSLCA_ORYSJ8.190e-5078.33Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLCA_ORYSI8.190e-5078.33Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLC1_ORYSJ9.055e-4976.67Probable xyloglucan glycosyltransferase 1 OS=Oryza... [more]
CSLC7_ORYSJ1.545e-4875.83Probable xyloglucan glycosyltransferase 7 OS=Oryza... [more]
CSLC9_ORYSJ5.869e-4875.00Probable xyloglucan glycosyltransferase 9 OS=Oryza... [more]
CSLC2_ORYSJ2.230e-4771.67Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC2_ORYSI1.888e-4670.83Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC4_ARATH5.493e-4669.17Xyloglucan glycosyltransferase 4 OS=Arabidopsis th... [more]
CSLC3_ORYSJ7.174e-4668.33Probable xyloglucan glycosyltransferase 3 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-744 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504255 ID=CF504255; Name=CF504255; organism=Citrus sinensis; type=EST; length=362bp
TGTGAATTGCCAGAATCTTATGAAGCTTATAGGAAACAACAGCACAGATG
GCATTCTGGACCAATGCAGTTGTTTCGCTTGTGCTTGCCTGACATCATAA
GAGCCAAGATAAGCATGGGGAAGAAATTTAATTTGATCTTTCTTTTCTTT
CTGCTCAGAAAACTTATCCTACCATTTTATTCTTTCACCCTCTTTTGTAT
AATTCTTCCCATGACAATGTTTATCCCAGAGGCTGAGCTCCCTGCTTGGG
TCGTCTGTTACATACCGGCCACCATGTCATTTCTCAACATTCTCCCTGCT
CCAAAATCCTTCCCATTTATTGTCCCTTACCTTCTTTTTGAAAACACAAT
GTCAGTGACCAA
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