CF504264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 5.464e-76 Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 MAF KAQK+KAYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGEDYSVEPADTRRPFRALLDVGLI+TTTG Sbjct: 1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTG 155
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 278.1 bits (710), Expect = 1.346e-74 Identity = 135/155 (87.10%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTG Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTG 155
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 277.715 bits (709), Expect = 1.758e-74 Identity = 135/155 (87.10%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTG Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTG 155
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 3.102e-71 Identity = 130/153 (84.97%), Postives = 140/153 (91.50%), Query Frame = 3 Query: 15 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 FVK QK+ AY+KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTG Sbjct: 4 FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 9.027e-71 Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = 3 Query: 15 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 FVK QK+ AY KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTG Sbjct: 4 FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 1.593e-67 Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 3 Query: 15 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 FVK QK+ AYFKRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV TNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EYEGNVEATGEDY VEPAD RRPFRALLDVGLI+TTTG Sbjct: 7 FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.495e-57 Identity = 110/156 (70.51%), Postives = 127/156 (81.41%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVE-PADTRRPFRALLDVGLIKTTTG 473 M FVK K+KAYFKR+QVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG++VGLTNYAAAYCTGLLLARR+L L + D+Y G + GED++VE D RPFRA LDVGL +TTTG Sbjct: 1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 6.280e-56 Identity = 106/155 (68.39%), Postives = 124/155 (80.00%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 M VK K+KAYFKR+QVK KRRREGKTDY AR RL QDKNKYNTPKYR +VR TNKDI+AQ+ + I GD V+A+AYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D Y+G+ E TGEDY+VE R PF+A+LD+GL +TTTG Sbjct: 1 MGLVKVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDIVAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTG 155
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 1.399e-55 Identity = 106/156 (67.95%), Postives = 124/156 (79.49%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTG 473 M FVK K+KAYFKR+QVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI+ QI A I GD V+ AAYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L +D+ YEG E G+++ VE D + FRA LDVGL +TTTG Sbjct: 1 MGFVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.399e-55 Identity = 104/155 (67.10%), Postives = 125/155 (80.65%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTG 473 M VK K+KAYFKR+QVK +RRREGKTDY AR RL QDKNKYNTPKYR +VR TNKD++AQ+ + I GD V+A+AY+HELPRYGL+VGLTNYAAAY TGLLLARR LK + +D Y+G+ E TGEDY+VE R PF+A+LD+GL +TTTG Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTG 155 The following BLAST results are available for this feature:
BLAST of CF504264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504264 ID=CF504264; Name=CF504264; organism=Citrus sinensis; type=EST; length=475bpback to top |