CF504265

Overview
NameCF504265
Unique NameCF504265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length305
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig777 contig Csv1_Contig777:7..311. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.027e-28
Identity = 57/87 (65.52%), Postives = 72/87 (82.76%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +LG   SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY R
Sbjct:   10 LLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQR 94          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.709e-27
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +L F PS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDR
Sbjct:    8 LLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDR 94          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.709e-27
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +L F PS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDR
Sbjct:    8 LLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDR 94          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.833e-26
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDR
Sbjct:    6 LLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDR 90          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.837e-25
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +LGF  SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDR
Sbjct:    6 LLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDR 90          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.344e-25
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +L FS S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R
Sbjct:    8 LLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQR 93          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.979e-25
Identity = 55/87 (63.22%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +LGF  SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDR
Sbjct:    6 LLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDR 90          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.190e-24
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +L F PS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R
Sbjct:    8 LLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYER 93          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.031e-24
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDR 304
            +LGF  SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDR
Sbjct:    6 LLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDR 90          
BLAST of CF504265 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.524e-24
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 2
Query:   44 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDR 304
            +LG   SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+R
Sbjct:    9 LLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYER 98          
The following BLAST results are available for this feature:
BLAST of CF504265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.027e-2865.52Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXC_TOBAC5.709e-2762.07Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC5.709e-2762.07Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU2.833e-2665.52Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_TOBAC1.837e-2562.07Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_NICPL5.344e-2563.22Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTX2_TOBAC6.979e-2563.22Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC1.190e-2462.07Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_TOBAC2.031e-2460.92Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTU6_ORYSJ4.524e-2454.44Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-754 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504265 ID=CF504265; Name=CF504265; organism=Citrus sinensis; type=EST; length=305bp
CTTAGAGAGAAAAAAAAAGAAAATGGCAAAAAGTGACGTGAAGGTTTTGG
GTTTTTCGCCAAGCCCATTTGTGATGAGGGCAAGAATCGCACTTAAGATC
AAGTCTGTGGAGTATGAGTTTCTGGAGGAGAATTTGGGATCCAAAAGCGA
GCTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCAGTTCTGATTC
ACAATGATAAGCCTGTTTGCGAATCTCTCATTATTGTCGAGTACGTGGAT
GAGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGA
CCGTG
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