CF504273

Overview
NameCF504273
Unique NameCF504273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504273 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 5.800e-35
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 1
Query:    7 QQQSKLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILE 213
            QQQ KLVV GYALTSKK KSFLQPKLE LAR KGI FVAID NRPLS+QGPFD+VLHKL GKEW +++E
Sbjct:   76 QQQQKLVV-GYALTSKKKKSFLQPKLELLARRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIE 143          

HSP 2 Score: 57.3806 bits (137), Expect = 5.800e-35
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 2
Query:  320 LFQEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLS 439
            + ++Y+Q HPEVTVLDPP +IQ ++NRQSMLQ +AD+ LS
Sbjct:  141 VIEDYQQKHPEVTVLDPPGSIQRIYNRQSMLQGMADLKLS 180          
BLAST of CF504273 vs. ExPASy Swiss-Prot
Match: ITPK2_ARATH (Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.503e-26
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1
Query:   19 KLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQILE 213
            K ++VGYALTSKK KSFLQPKLEGLARNKGILFVAIDQN+PLS+QGPFDIVLHK  GKEWR+ILE
Sbjct:   39 KSIIVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILE 103          

HSP 2 Score: 66.6254 bits (161), Expect = 4.943e-11
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 2
Query:  269 FKLPASEHVSTSWPSC*LFQEYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADMNLS 439
            F +   + +   W    + +E+R  HP+VTVLDPP AI HL NRQSMLQCVADMNLS
Sbjct:   86 FDIVLHKQIGKEWRR--ILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLS 140          
BLAST of CF504273 vs. ExPASy Swiss-Prot
Match: ITPK1_ARATH (Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.484e-12
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 1
Query:   28 VVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWRQIL 210
            +VGYAL +KK  SF+QP L   +R +GI  V +D  + L +QG  D ++HKL    W++ L
Sbjct:   10 LVGYALAAKKQHSFIQPSLIEHSRQRGIDLVKLDPTKSLLEQGKLDCIIHKLYDVYWKENL 70          

HSP 2 Score: 36.5798 bits (83), Expect = 2.484e-12
Identity = 16/34 (47.06%), Postives = 23/34 (67.65%), Query Frame = 2
Query:  329 EYRQTHPEVTVLDPPYAIQHLHNRQSMLQCVADM 430
            E+R+  P V V+D P AI+ LHNR SML+ +  +
Sbjct:   72 EFREKCPGVPVIDLPEAIERLHNRVSMLEVITQL 105          
BLAST of CF504273 vs. ExPASy Swiss-Prot
Match: ITPK1_MAIZE (Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 1
Query:   28 VVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLTGKEWR 201
            V+GYAL  KK +SF+QP L   A ++G+  V +D ++PL++QGPF +++HKL G +WR
Sbjct:   20 VIGYALAPKKQQSFIQPSLVAQAASRGMDLVPVDASQPLAEQGPFHLLIHKLYGDDWR 77          
The following BLAST results are available for this feature:
BLAST of CF504273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ITPK3_ARATH5.800e-3579.71Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidops... [more]
ITPK2_ARATH2.503e-2686.15Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidops... [more]
ITPK1_ARATH2.484e-1242.62Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidops... [more]
ITPK1_MAIZE2.970e-1148.28Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-762 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504273 ID=CF504273; Name=CF504273; organism=Citrus sinensis; type=EST; length=441bp
CAAACTCAGCAGCAATCCAAATTAGTTGTTGTTGGTTACGCTCTTACCTC
CAAGAAGACTAAGAGCTTCTTGCAGCCTAAGCTTGAAGGCTTGGCTAGGA
ATAAGGGAATATTATTTGTTGCGATTGACCAGAACCGACCACTTTCAGAT
CAGGGCCCTTTTGACATTGTGCTGCATAAGTTAACTGGGAAAGAGTGGCG
CCAGATTCTCGAGAGTGCTTGCTCTTTCGTTGGTCATGAATCTTGAATTG
ATAGTAGTTGTACGGGGCTTTAAGCTTCCAGCAAGTGAGCATGTTTCTAC
TTCCTGGCCATCTTGCTGATTGTTTCAGGAATACAGGCAAACACATCCAG
AAGTCACAGTTCTCGATCCTCCATATGCTATTCAACACTTGCACAACCGT
CAATCCATGCTTCAGTGTGTAGCTGATATGAATCTGTCTAA
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