CF504281 | Citrus Genome Database

Overview


Name	CF504281
Unique Name	CF504281
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	432

Libraries


Library Name	Type
Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CF504281_ssr20	microsatellite	CF504281_ssr20:20..31.	BLAST: Citrus ESTs to Prunus persica proteins V1
CF504281_ssr54	microsatellite	CF504281_ssr54:54..71.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2281	contig	Csv1_Contig2281:130..561.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	USDA-FP_119000-770 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_E05 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF504281 ID=CF504281; Name=CF504281; organism=Citrus sinensis; type=EST; length=432bp
GGCAACGTTAGCAACAGCCACAACAACAACAGCAGTAGCGGCCTTTGCCT
TCCCTTCTTCTTCTTCTTCTTTTTCGTCAAAATCTCATCAACCCAAATCC
CAAAATCTCTCCTTTTTCTCTTCACAATCTCTCTCACTTCTCTATTCAAA
TAAATCGCCTCTTGTCAAAAACTTCAGCAACCCACCTTCCGCTCTTCCCA
TGGACGCTTCCACATCTGATCACAAAAACACATCCCAGGGGGATCAGGGG
TTGCCTGAGCTTCTGACAGAATACATGGTGGACATGAAGTGTGAGGGTTG
CGTTGATGCCGTCAAGCAGAAGTTGCAGACTGTTACTGGAGTCAAGAATG
TTGAGGTGGACTTGAGCAATCAAGTTGTGAGAATTTTGGGATCTTCACCT
CTGAAGACCATGACCGAAGCTTTGGAGCAAAC