CF504284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.708e-31 Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 65 VEADEHTVNSSKGTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 ++ D+ T N+ Y IDCGGAC ARCRLSSRP LC+RACGTCCARCNCVPPGT+GNTE CPCYA++TTH +RKCP Sbjct: 24 IQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.650e-29 Identity = 58/82 (70.73%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 62 LVEADEHTVNSSKGTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 LV+AD NS K GY K IDCG AC ARCRLS RP LCHRACGTCC RCNCVPPGT GN + C CYA++TTH GRRKCP Sbjct: 20 LVQADVE--NSQKKNGYAKK-IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.449e-24 Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 89 NSSKGTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 +S G G K IDCGG C+ RC SSRPNLC RAC +CC RCNCVPPGTAGN +CPCYA++TT GR KCP Sbjct: 29 DSQVGEGVVK--IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.449e-24 Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 68 EADEHTVNSSK-GTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 E H + +K G G K IDCGG C+ RC SSR LC RAC +CC+RCNCVPPGT+GNT +CPCYA++TTH GR KCP Sbjct: 21 ELHVHAADGAKVGEGVVK--IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.746e-12 Identity = 32/73 (43.84%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 89 NSSKGTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 N +G +PT DC C RC +S C C CCA C CVP G GN + CPCY N T G+ KCP Sbjct: 25 NVVEGYNKLRPT-DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.151e-11 Identity = 32/71 (45.07%), Postives = 38/71 (53.52%), Query Frame = 2 Query: 95 SKGTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 S+G +P+ DC C RC +S C C CCA+C CVP GT GN + CPCY N T G KCP Sbjct: 45 SEGRLHPQ---DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.563e-11 Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 2 Query: 131 CGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 C C+ RC + + C + CG CC C CVP GT GN CPCY + G+ KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CF504284 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.348e-11 Identity = 30/69 (43.48%), Postives = 34/69 (49.28%), Query Frame = 2 Query: 101 GTGYPKPTIDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAGNTEVCPCYANMTTHHGRRKCP 307 G G K T C C RC+ + C C CC +C CVPPG GN +VC CY N T G KCP Sbjct: 39 GPGSLKRT-QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106 The following BLAST results are available for this feature:
BLAST of CF504284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504284 ID=CF504284; Name=CF504284; organism=Citrus sinensis; type=EST; length=391bpback to top |