CF504286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUM1_ARATH (Fumarate hydratase 1, mitochondrial OS=Arabidopsis thaliana GN=FUM1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 2.851e-34 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RSLQNF+IGGERERMPEPIVRAFG+LKKCAAKVNMEYGLDP IGKAIMQAAQEVAEGKLNDHFPLVVWQTG Sbjct: 56 RSLQNFEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 126
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUM2_ARATH (Fumarate hydratase 2, chloroplastic OS=Arabidopsis thaliana GN=FUM2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.377e-33 Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RSLQNF+IGG+RERMPEPIVRAFG+LKKCAAKVNMEYGLDP IG+AIM+AAQEVAEGKLNDHFPLVVWQTG Sbjct: 63 RSLQNFEIGGDRERMPEPIVRAFGVLKKCAAKVNMEYGLDPMIGEAIMEAAQEVAEGKLNDHFPLVVWQTG 133
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_RHIOR (Fumarate hydratase, mitochondrial OS=Rhizopus oryzae GN=FUMR PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.086e-25 Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RSLQNFDIGG ERMPEP++RAFG+LKK AA VNM YGLDP +G+AI +AA EV +G L DHFPLVVWQTG Sbjct: 57 RSLQNFDIGGPTERMPEPLIRAFGVLKKAAATVNMTYGLDPKVGEAIQKAADEVIDGSLIDHFPLVVWQTG 127
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_RAT (Fumarate hydratase, mitochondrial OS=Rattus norvegicus GN=Fh PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.126e-25 Identity = 53/71 (74.65%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP P+++AFGILK+ AA+VN EYGLDP I AIM+AA EVAEGKLNDHFPLVVWQTG Sbjct: 71 RSTMNFKIGGATERMPIPVIKAFGILKRAAAEVNQEYGLDPKIASAIMKAADEVAEGKLNDHFPLVVWQTG 141
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_MOUSE (Fumarate hydratase, mitochondrial OS=Mus musculus GN=Fh PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.389e-25 Identity = 53/71 (74.65%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP P+++AFGILK+ AA+VN EYGLDP I AIM+AA EVAEGKLNDHFPLVVWQTG Sbjct: 71 RSTMNFKIGGATERMPIPVIQAFGILKRAAAEVNQEYGLDPKIASAIMKAADEVAEGKLNDHFPLVVWQTG 141
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_MACFA (Fumarate hydratase, mitochondrial OS=Macaca fascicularis GN=FH PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.038e-25 Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP P+++AFGILK+ AA+VN +YGLDP I AIM+AA EVAEGKLNDHFPLVVWQTG Sbjct: 74 RSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTG 144
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_HUMAN (Fumarate hydratase, mitochondrial OS=Homo sapiens GN=FH PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 7.038e-25 Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP P+++AFGILK+ AA+VN +YGLDP I AIM+AA EVAEGKLNDHFPLVVWQTG Sbjct: 74 RSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTG 144
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_PIG (Fumarate hydratase, mitochondrial OS=Sus scrofa GN=FH PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.048e-24 Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP P+++AFGILK+ AA+VN +YGLDP I AIM+AA EVAEGKLNDHFPLVVWQTG Sbjct: 30 RSTMNFKIGGVTERMPIPVLKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTG 100
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_SCHPO (Fumarate hydratase, mitochondrial OS=Schizosaccharomyces pombe GN=fum1 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.917e-22 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RSLQNF IGGE+ER+P P+VRAFG+LK+ AA VN E+GLDP + AI QAAQEV +G+L+D+FPLVV+QTG Sbjct: 82 RSLQNFRIGGEKERLPLPLVRAFGVLKRAAASVNREFGLDPKLADAIEQAAQEVIDGRLDDNFPLVVFQTG 152
BLAST of CF504286 vs. ExPASy Swiss-Prot
Match: FUMH_DANRE (Fumarate hydratase, mitochondrial OS=Danio rerio GN=fh PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.503e-22 Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 213 RS NF IGG ERMP ++RAFGILKK AA+VN +YGLDP I AIM+AA EV GKL+DHFPLVVWQTG Sbjct: 73 RSTMNFRIGGVTERMPIQVIRAFGILKKAAAEVNKDYGLDPKIADAIMKAADEVESGKLDDHFPLVVWQTG 143 The following BLAST results are available for this feature:
BLAST of CF504286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504286 ID=CF504286; Name=CF504286; organism=Citrus sinensis; type=EST; length=233bpback to top |