CF504295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKI Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKI Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKI Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKI Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKI Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.874e-16 Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKI Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15 Identity = 36/50 (72.00%), Postives = 46/50 (92.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKI Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 2.915e-15 Identity = 36/50 (72.00%), Postives = 46/50 (92.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKI Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_MOUSE (40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.915e-15 Identity = 36/50 (72.00%), Postives = 46/50 (92.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKI Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
BLAST of CF504295 vs. ExPASy Swiss-Prot
Match: RS17_ICTPU (40S ribosomal protein S17 OS=Ictalurus punctatus GN=rps17 PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 2.915e-15 Identity = 36/50 (72.00%), Postives = 46/50 (92.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKI 247 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKI Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50 The following BLAST results are available for this feature:
BLAST of CF504295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504295 ID=CF504295; Name=CF504295; organism=Citrus sinensis; type=EST; length=248bpback to top |