CF504298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 231.876 bits (590), Expect = 1.360e-60 Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP 459 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD SG+ VEPQ +AP Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAP 128
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 3.958e-60 Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAPPVF 468 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIK D++KVDKETL+MLA+LGMSDI+G+ +VE Q +AP VF Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVF 131
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 229.95 bits (585), Expect = 5.169e-60 Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP 459 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ VEPQ +AP Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMAP 128
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.152e-59 Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMIAP-PVF 468 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ V+PQ +AP P F Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQAMAPIPAF 132
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 3.704e-58 Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVE--VEPQSMIAPPVF 468 MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTD I+VDKETLDML+ALGMSD+ G+V+ EPQ++ A P + Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALPSY 133
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17B_SCHPO (40S ribosomal protein S17-B OS=Schizosaccharomyces pombe GN=rps17b PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.324e-39 Identity = 80/118 (67.80%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLV 429 MGRVRTKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKRIQ+GPVRGIS KLQEEERER+ +VP+ S ++ D+I VD++T DML ALG I +V Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17_THEPA (40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 2.949e-39 Identity = 75/112 (66.96%), Postives = 98/112 (87.50%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 411 MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17_THEAN (40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 2.949e-39 Identity = 75/112 (66.96%), Postives = 98/112 (87.50%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 411 MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 5.030e-39 Identity = 77/122 (63.11%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 441 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of CF504298 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 6.569e-39 Identity = 77/122 (63.11%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 76 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 441 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122 The following BLAST results are available for this feature:
BLAST of CF504298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504298 ID=CF504298; Name=CF504298; organism=Citrus sinensis; type=EST; length=513bpback to top |