CF504301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31 Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPE 443 P+ + ISFT+PRDAC +SVS F+SA SD VW+ FLPP+Y KKELYF+LCHNP+LI++GKKSF L+K SGK+C M+S+++L I W S+ YW+WISIPE Sbjct: 65 PEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFAS-------KKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPE 179
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.986e-28 Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMIS-ARDLLIIWSSTSAYWRWISIPE 443 P+ + ISFT+PRDAC +SVS F+SA SD+VW+ FLP DY KKELYF++C NP+L+++G KSF L+K++GKKC+M+S + + I W ST YWRWISIPE Sbjct: 46 PEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS-------KKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPE 161
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.895e-27 Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 54 RKQKWSFYPKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPE 443 R ++ P+ + IS T+PRDAC ++SVS KSAA+SD VWE FLP +Y KKE++ SL N +L++ GKKSF ++K SGKKCYM+SA +L IIW + AYW+WI++PE Sbjct: 28 RASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSANHLS-------KKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPE 150
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.403e-27 Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 75 YPKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPE 443 +P+ + ISFT PRDAC ++VS F+S +SD +WE FLP DY KKELYFSLC++P+L D+ KKS L+K SGK+C M+SA +L IIW YW+WI IPE Sbjct: 17 FPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFSS-------KKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 132
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.025e-25 Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPE 443 P+ + T ISFT+P DACR+S+VS + +SAA+S+ WE FLP DY K+L+ C +P+LI++G+ SF ++K+SGKKC+M+SAR L I+W + +W W+SIP+ Sbjct: 7 PEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFS-------NKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPD 121
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.561e-24 Identity = 54/122 (44.26%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPE 443 P+ + +SFT+P+DAC L+SVS F SA +SD VWE F+PP+Y KKELYF+LC +LID+GKKS ++K + K+C MISA +L I W ++ WRWI P+ Sbjct: 40 PEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFLS-----KKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQ 156
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.561e-24 Identity = 56/126 (44.44%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPEVSGG 455 P+ + +S TTP D CRLS+VS+IF+SAA SD VW FLP D+ +K+L+FSL NP+LI+ SFSL+++SG KCYM++AR L I+W YW WIS+P G Sbjct: 5 PEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLPT-------RKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFG 123
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.076e-22 Identity = 50/124 (40.32%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAYWRWISIPEVS 449 P+ + ISFT+PRD C +SVS F A + D++WE FLP +Y KK+LYF+LC++P+L+++GKKSF L+ SGKKC +++A++L I + YW+WI + E S Sbjct: 49 PEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRVFSS-------KKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESS 165
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.190e-21 Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDLLIIWSSTSAY 419 P+ + ISFTTPRDAC +SVS F+SA +SD+VWE FLP DY KKEL FSLC P+LI+ GKKSF LDK SG+KC M+S + ++I W ++ + Sbjct: 17 PENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPESRVFLS-------KKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
BLAST of CF504301 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 7.658e-21 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 78 PKVALPTPISFTTPRDACRLSSVSTIFKSAAESDAVWESFLPPDYXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKSFSLDKQSGKKCYMISARDL-LIIWSSTSAYWRWISIPE 443 P+ + ISFT+P DAC ++VS IF+SA +SD VWE FLP DY KKELYFSLC++P+LI++GK S L+K SGK+C M+SA + L + S + WI PE Sbjct: 28 PEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSRVFSS-------KKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPE 143 HSP 2 Score: 21.557 bits (44), Expect = 7.658e-21 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 65 MELLPEGCIAN 97 ++ LPEGCI+N Sbjct: 24 LDSLPEGCISN 34 The following BLAST results are available for this feature:
BLAST of CF504301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504301 ID=CF504301; Name=CF504301; organism=Citrus sinensis; type=EST; length=460bpback to top |