CF504329

Overview
NameCF504329
Unique NameCF504329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length348
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504329 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 8.653e-36
Identity = 71/108 (65.74%), Postives = 81/108 (75.00%), Query Frame = 3
Query:   54 DSNDNELEQLQDGGE----------GFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQI 347
            D+ D  +E+ Q  G+          GF  P TNSFG+TFRDY  ESER++GVEEFYR  HI QT DFV++MREEY KLNR EMSIWECCELLNEF+DESDPDLDEPQI
Sbjct:   13 DAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQI 120          
BLAST of CF504329 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.518e-35
Identity = 74/117 (63.25%), Postives = 83/117 (70.94%), Query Frame = 3
Query:   30 WHRMAVLADSNDNELEQLQDGG-----------EGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQI 347
            +  ++    S DN  E   DGG           E F  PE N+FG+ FRDY VESERQKGVEEFYR QHINQT DFVK+MR EYGKL+++ MSIWECCELLNE VDESDPDLDEPQI
Sbjct:   10 FEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQI 126          
BLAST of CF504329 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 9.900e-32
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 3
Query:   54 DSNDNELEQLQDGG---------EGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQI 347
            +  DNEL  + DGG         + F  P+ N  G +FRDY   ESERQ+GVEEFYR QHI+QT DFVK+MR+EYGKLN++EMSIWECCELLN  VDESDPDLDEPQI
Sbjct:   21 EERDNEL--VLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQI 126          
BLAST of CF504329 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.293e-31
Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 3
Query:   63 DNELEQLQDGGEGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQI 347
            DN  E + DGG  F VP++N+FG  FR+Y  ESER++ VEEFYR  HINQT DFV+RMREEYG++++ EM IWEC ELLNEF+D+SDPDLD PQI
Sbjct:   25 DNAAELVLDGG--FVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQI 117          
BLAST of CF504329 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.025e-28
Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 3
Query:   60 NDNELEQLQDGGEGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQI 347
            +D  + ++    E F  PE N+FG+ FRDY    SERQK VE FY TQH NQT DFV++MR EYGKL+++ M+IWECCEL  E VDESDPDLDEPQI
Sbjct:   27 SDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQI 123          
The following BLAST results are available for this feature:
BLAST of CF504329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MIOX1_ARATH8.653e-3665.74Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH2.518e-3563.25Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH9.900e-3263.89Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ1.293e-3165.26Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX5_ARATH1.025e-2860.82Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-818 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504329 ID=CF504329; Name=CF504329; organism=Citrus sinensis; type=EST; length=348bp
GGAGAAGGAGAATCACCAGGCTCTGCAATTGGCACAGGATGGCTGTTCTC
GCTGATTCAAATGACAACGAATTGGAGCAGCTGCAGGATGGAGGAGAAGG
ATTCACGGTGCCTGAGACTAATTCGTTTGGTCAAACTTTCAGGGATTATG
GTGTTGAAAGTGAGCGGCAAAAGGGCGTGGAGGAATTCTATAGAACTCAA
CATATTAATCAGACCTGTGACTTTGTGAAAAGGATGAGAGAAGAGTATGG
AAAACTGAATAGGGTGGAAATGAGTATATGGGAATGCTGTGAGCTACTAA
ATGAATTTGTTGATGAGAGTGATCCCGACCTTGATGAGCCTCAAATTG
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