CF504330

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_ARATH (DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 6.675e-29
Identity = 71/170 (41.76%), Postives = 94/170 (55.29%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYAD-------------SGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXCSGLKRYATPFATPSVDAIT 475
            D LDDDG    G  +   D++IGK                +  DHSI L+H+E GMV +V+L++N DG  F  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+ PDI++NPHA PSR T GQ                   G +  ATPF   +VD I+
Sbjct:  854 DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAH------MGKEGDATPFTDVTVDNIS 1017          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_SOLLC (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum GN=RPB2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.537e-28
Identity = 70/170 (41.18%), Postives = 93/170 (54.71%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYAD-------------SGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXCSGLKRYATPFATPSVDAIT 475
            D LDDDG    G  +   D++IGK                +  DHS  L+H+E GMV +V+L++N DG  F  V +R VR P +GDKFSS HGQKG +G   +QE+ P+T++GI PDI++NPHA PSR T GQ                   G +  ATPF   +VD I+
Sbjct:  853 DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH------MGKEGDATPFTDVTVDNIS 1016          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_SCHPO (DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe GN=rpb2 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25
Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYADSGADH---------------SIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXCSGLKRYATPFATPSVDAIT 475
            D L+DDG    G  +   DI+IGK A    DH               S  L+ TE G+V +V++++N +G  F  V +R  R P +GDKF+S HGQKG +G     E+ PF+ QGIVPDI+INPHA PSR T                     SG +  ATPF   +V+A++
Sbjct:  880 DKLEDDGLIAPGTRVSGEDIIIGKTAPIPLDHEELGQRTQLHAKRDVSTPLRSTESGIVDQVMVTTNQEGLKFVKVRMRSTRIPQIGDKFASRHGQKGTIGMTYRHEDMPFSAQGIVPDIIINPHAIPSRMTVAH------LVECQLSKVSALSGFEGDATPFTDVTVEAVS 1045          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_DICDI (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.637e-25
Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYA-------DSGA--------DHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXCSGLKRYATPFATPSVDAIT 475
            + +DDDG    G  +   DI+IGK         D G         D S  L+ +E G+V +V+L+++ +G  F  V +R +R P +GDKFSS HGQKG  G    QE+ PFT++GIVPDI++NPHA PSR T GQ                  +G +  ATPF   +V+AI+
Sbjct:  842 EKIDDDGLVAPGVRVAGDDIIIGKTTPLPPSDDDLGPKTRRHTKRDSSTALRSSETGIVDQVILTTSGEGFKFCKVRVRSMRVPQIGDKFSSRHGQKGTCGMAYRQEDLPFTVEGIVPDIIVNPHAIPSRMTIGQ------LIECLLGKVSASTGDEGDATPFTDVTVEAIS 1007          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPOB1_METJA (DNA-directed RNA polymerase subunit B' OS=Methanocaldococcus jannaschii GN=rpoB1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 2

Query:   11 LDDDGFPFIGANLQCGDIVIGKYAD---------------SGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 364
            L++DG   + ++++ GD+++GK +                   D S+ ++H E G + KV+L+   +G     V +R +R P LGDKF+S HGQKGV+G    QE+ PFT  GIVPDI+INPHA PSR T GQ
Sbjct:  281 LEEDGIVAVESHVKGGDVIVGKTSPPRFLEEHEITIQVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRIPELGDKFASRHGQKGVMGLTVPQEDLPFTESGIVPDIIINPHAIPSRMTVGQ 413          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_CAEEL (DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans GN=rpb-2 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 4.950e-24
Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYA-----DSGADHSIK----------LKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPG 361
            D LD+DG    G  +   D++IGK       D   D S K          L+ +E G+V +V+LS N DG  F  + +R VR P +GDKF+S HGQKG +G +  QE+ PFT +G+ PDI+INPHA PSR T G
Sbjct:  852 DKLDEDGIISPGMRVSGDDVIIGKTVALPDIDDDLDASGKKYPKRDASTFLRSSETGIVDQVMLSLNSDGNKFVKIRMRSVRLPQIGDKFASRHGQKGTMGIMYRQEDMPFTAEGLTPDIIINPHAVPSRMTIG 985          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPOB1_METTH (DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum GN=rpoB1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.466e-24
Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 2

Query:   11 LDDDGFPFIGANLQCGDIVIGK---------------YADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 364
            LD+DG     A +  GD++IGK                A+   + S+ ++H E+G+V  V+L+   +G   + + +R+ R P LGDKF+S HGQKGV+G + SQE+ PFT  GIVPD+++NPHA PSR + GQ
Sbjct:  276 LDEDGIINPEAEVSSGDVLIGKTSPPRFLEEIDEFGTVAERRRETSVTVRHGEKGIVDAVLLTETVEGSRLAKIRVREQRQPELGDKFASRHGQKGVVGLIVSQEDMPFTEDGIVPDLIVNPHAIPSRMSVGQ 408          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPOB1_METVS (DNA-directed RNA polymerase subunit B' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB1 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.440e-23
Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 2

Query:    8 SLDDDGFPFIGANLQCGDIVIGKYA---------------DSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 364
            +L DDG   + + ++ GD+++GK +                   D S+ ++H E G+V  V+LS   +G     V +R +R P  GDKF+S HGQKGV+G +  QE+ PFT  G++PD++INPHA PSR T GQ
Sbjct:  276 NLGDDGLIDLESEVRSGDVILGKTSPPRFLEEQEITLQTKSQRRDTSVTIRHGEEGVVDLVILSETKEGNRLGKVRVRDLRVPEFGDKFASRHGQKGVIGLVVPQEDLPFTEDGVIPDLIINPHAIPSRMTIGQ 409          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPC2_SCHPO (DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.881e-23
Identity = 59/136 (43.38%), Postives = 77/136 (56.62%), Query Frame = 2

Query:   11 LDDDGFPFIGANLQCGDIVIGKYADSGA-DHSIKLKHT-----------------ERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 364
            ++DDG   +G  +Q G I + K   + A D+SI L HT                 E G + KV+L++ D  +    V +RQ R P LGDKFSS HGQKGV G +  QE+ PF  QGI PDI++NPH FPSR T G+
Sbjct:  838 VEDDGLAGVGCRVQPGQIYVNKQTPTNALDNSITLGHTQTVESGYKATPMTYKAPEPGYIDKVMLTTTDSDQTLIKVLMRQTRRPELGDKFSSRHGQKGVCGVIVQQEDMPFNDQGICPDIIMNPHGFPSRMTVGK 973          

BLAST of CF504330 vs. ExPASy Swiss-Prot
Match: RPB2_YEAST (DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae GN=RPB2 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.881e-23
Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 2

Query:    5 DSLDDDGFPFIGANLQCGDIVIGKYAD---------------SGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 355
            D LDDDG    G  +   D++IGK                  S  D S  L+ TE G+V +V++++N DG  F  V +R  + P +GDKF+S HGQKG +G    +E+ PFT +GIVPD++INPHA PSR T
Sbjct:  891 DKLDDDGLIAPGVRVSGEDVIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIVDQVLVTTNQDGLKFVKVRVRTTKIPQIGDKFASRHGQKGTIGITYRREDMPFTAEGIVPDLIINPHAIPSRMT 1022