CF504331

Overview
NameCF504331
Unique NameCF504331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length127
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9341 contig Csv1_Contig9341:416..542. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504331 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13
Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1
Query:    1 LVIATGSTVLRVTDFGVEGADAKNIFYLGEIDDADKLVEAIK 126
            L+IATGSTVLR+TDFGV+GAD+KNI YL EIDDADKLVEAIK
Sbjct:  118 LIIATGSTVLRLTDFGVKGADSKNILYLREIDDADKLVEAIK 159          
BLAST of CF504331 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13
Identity = 34/42 (80.95%), Postives = 41/42 (97.62%), Query Frame = 1
Query:    1 LVIATGSTVLRVTDFGVEGADAKNIFYLGEIDDADKLVEAIK 126
            L+IATGSTV++++DFGV+GADAKNIFYL EIDDAD+LVEAIK
Sbjct:  118 LIIATGSTVIKLSDFGVQGADAKNIFYLREIDDADQLVEAIK 159          
BLAST of CF504331 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 33/42 (78.57%), Postives = 41/42 (97.62%), Query Frame = 1
Query:    1 LVIATGSTVLRVTDFGVEGADAKNIFYLGEIDDADKLVEAIK 126
            LVIATG+TVL+++DFGV+GAD+KNIFYL EIDDAD+LVEA+K
Sbjct:  118 LVIATGTTVLKLSDFGVQGADSKNIFYLREIDDADQLVEALK 159          
BLAST of CF504331 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 1
Query:    1 LVIATGSTVLRVTDFGVEGADAKNIFYLGEIDDADKLVEAIK 126
            LVIATGS V+R+TDFGV GA+AKNIFYL E+DDADKL EAIK
Sbjct:  117 LVIATGSAVIRLTDFGVIGANAKNIFYLREVDDADKLYEAIK 158          
The following BLAST results are available for this feature:
BLAST of CF504331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MDAR3_ARATH2.749e-1385.71Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARS_CUCSA6.124e-1380.95Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR_SOLLC2.327e-1278.57Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR_PEA6.771e-1280.95Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-820 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504331 ID=CF504331; Name=CF504331; organism=Citrus sinensis; type=EST; length=127bp
TTAGTAATTGCAACTGGTTCTACAGTTTTACGGGTGACTGATTTTGGTGT
TGAAGGTGCTGATGCCAAAAATATCTTCTACTTAGGAGAAATTGATGATG
CTGATAAGCTGGTTGAAGCAATAAAAG
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