CF504357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.927e-20 Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 12 GEFPTASSE--SRRLLMACVSENSDDL------IRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 G+F SE R++ A +E DL +++LV +L+S S++ Q+QA E+RLLAK+ +NR+ I +GA+ LV L+ S+D QE VTA+LNLS+ D NK+ IA +GAI+PL+ L+ G+S A Sbjct: 510 GQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEA 640
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19 Identity = 47/101 (46.53%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 66 SENSDDLIRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTG 368 S + + +++L+ DL+S S++ Q++A IR+LA+N ++NR+ IA+ A+ LVSL+ S+D ++Q VT +LNLS+ D NK LIA SGAI PL+ LKTG Sbjct: 416 SSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTG 516
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18 Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 15 EFPTASSESRRLLMACVSENSDDLIRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 E P S++ + AC S + I L++ L S +Q+ AA E+RLLAK + NR+ IA+AGA+ L+SL+SSSD + QE+ VTA+LNLS+ ++NK I SSGA+ +V LK G+ A Sbjct: 346 EPPKRSTQPNKPTPACSSSERAN-IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEA 466
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.199e-18 Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 15 EFPTASSESRRLLMACVSENSDDLIRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 E P S++ + AC S + I L++ L S +Q+ AA E+RLLAK + NR+ IA+AGA+ L+SL+SSSD + QE+ VTA+LNLS+ ++NK I SSGA+ +V LK G+ A Sbjct: 346 EPPKRSTQPNKPTPACSSSERAN-IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEA 466
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18 Identity = 45/84 (53.57%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 129 DQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 DQ+ AA EIRLLAK ++NR+ IA+AGA+ LV L+S+ D ++QE+ VTA+LNLS+C+ NK I S+GAI +V+ LK G+ A Sbjct: 368 DQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEA 451
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.175e-17 Identity = 47/107 (43.93%), Postives = 71/107 (66.36%), Query Frame = 3 Query: 66 SENSDDL--IRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 ++NS D+ IR LV L S S D++ A EIR L+K ++NR+ IA+AGA+ LV+L++S D QE +T +LNLS+ + NK+LI +GA+ +V+ L+ GT A Sbjct: 324 TKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEA 430
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.821e-16 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 93 QLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 +LV DL+S S + AA EIR L N ENR+ I + GA+ PL+SL+ S + QE+ VTA+LNLS+ + NK +I GAI+PLV L TG A Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRA 571
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.821e-16 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 87 IRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISSSDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 + L+ L + + Q+ AA E+RLLAK +NR+ IA+AGA+ LV L+SS DP+ QE+ VTA+LNLS+ + NK I +GAI +V LK G+ A Sbjct: 347 VLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEA 444
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.334e-15 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 87 IRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLISS-SDPQVQEYGVTAILNLSLCDENKQLIASSGAIKPLVRSLKTGTSTA 380 IR LV L S SI D++ A EIR L+K ++NR+ IA+AGA+ LV L++S D + QE VT ILNLS+ + NK+LI +GA+ +V L+ G+ A Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEA 441
BLAST of CF504357 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.275e-15 Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 69 ENSDDLIRQLVADLESCSINDQKQAAMEIRLLAKNKSENRLKIAKAGAVKPLVSLIS-SSDPQVQEYGVTAILNLSLCDENK-QLIASSGAIKPLVRSLKTGTSTA 380 ++ + I +L+ L S D++ AA EIRLLAK + NR+ IA +GA+ LV+L++ S+D + QE+ VT+ILNLS+C ENK +++ SSGA+ +V L+ G+ A Sbjct: 351 DDEHNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEA 456 The following BLAST results are available for this feature:
BLAST of CF504357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504357 ID=CF504357; Name=CF504357; organism=Citrus sinensis; type=EST; length=380bpback to top |