CF504364

Overview
NameCF504364
Unique NameCF504364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length372
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig777 contig Csv1_Contig777:1..369. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.588e-29
Identity = 59/84 (70.24%), Postives = 74/84 (88.10%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 352
            LKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K
Sbjct:   22 LKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDK 103          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.073e-29
Identity = 56/89 (62.92%), Postives = 75/89 (84.27%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSAL 367
            LK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K   A+
Sbjct:   26 LKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAV 112          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.292e-28
Identity = 52/83 (62.65%), Postives = 68/83 (81.93%), Query Frame = 2
Query:  110 KSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWF 358
            K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K +
Sbjct:   27 KEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLY 109          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.292e-28
Identity = 52/83 (62.65%), Postives = 68/83 (81.93%), Query Frame = 2
Query:  110 KSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWF 358
            K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K +
Sbjct:   27 KEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLY 109          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.711e-28
Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEK 352
            L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+K
Sbjct:   25 LNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDK 111          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.535e-27
Identity = 55/84 (65.48%), Postives = 72/84 (85.71%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 352
            LKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K
Sbjct:   22 LKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDK 103          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.631e-27
Identity = 53/84 (63.10%), Postives = 71/84 (84.52%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 352
            LKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K
Sbjct:   22 LKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDK 103          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.643e-26
Identity = 52/84 (61.90%), Postives = 71/84 (84.52%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEK 352
            LK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K
Sbjct:   22 LKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDK 103          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.643e-26
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALR 370
            L +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K +S  R
Sbjct:   24 LALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKIYSTGR 112          
BLAST of CF504364 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.780e-26
Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  101 LKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALR 370
            L +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K +S  R
Sbjct:   24 LALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGR 112          
The following BLAST results are available for this feature:
BLAST of CF504364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_SOLTU1.588e-2970.24Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX6_SOYBN2.073e-2962.92Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXC_TOBAC2.292e-2862.65Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX4_TOBAC2.292e-2862.65Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTU6_ORYSJ8.711e-2863.22Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX2_TOBAC2.535e-2765.48Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC9.631e-2763.10Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC1.643e-2661.90Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_NICPL1.643e-2661.11Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTXA_TOBAC4.780e-2660.00Probable glutathione S-transferase parA OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-853 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504364 ID=CF504364; Name=CF504364; organism=Citrus sinensis; type=EST; length=372bp
GAGCAGAGCTTAGAGAGAAAAAAAAAGAAAATGGCAAAAAGTGACGTGAA
GGTTTTGGGTTTTTCGCCAAGCCCATTTGTGATGAGGGCAAGAATCGCAC
CTTAAGATCAAGTCTGTGGAGTATGAGTTTCTGGAGGAGAATTTGGGATC
CAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCAG
TTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCTCATTATTGTCGAG
TACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGA
TCCTTATGACCGTGCGGTTGCTCGTTTCTGGGCCGCTTACGTTGATGAGA
AGTGGTTCTCTGCCTTGAGAGA
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