CF504385

Overview
NameCF504385
Unique NameCF504385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1895 contig Csv1_Contig1895:83..535. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF504385 vs. ExPASy Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 7.760e-13
Identity = 44/102 (43.14%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:   88 EANLHCLEPWTKRKRSKRPHNPPTEEEYLALCLVMLARGTTSTAVLTNCNTTTAASQRQKXXXXXXXXXXXXXDQKLLFKCSVCDKAFSSYQALGGHKASHR 393
            E + H L+ W KRKRS+R  +   EEE LALCL+ML+RG           +  A    +                   FKCSVC K+FSSYQALGGHK SHR
Sbjct:   34 EESGHVLQGWAKRKRSRRQRS---EEENLALCLLMLSRGGKQRVQAPQPESFAAPVPAE-------------------FKCSVCGKSFSSYQALGGHKTSHR 113
The following BLAST results are available for this feature:
BLAST of CF504385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZFP1_WHEAT7.760e-1343.14Zinc finger protein 1 OS=Triticum aestivum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-874 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504385 ID=CF504385; Name=CF504385; organism=Citrus sinensis; type=EST; length=453bp
CTTGGTTTTAGATTCAAAAGAGTAACGGAGATGGCACTGGAAGCTCTCAA
CTCTCCAACTACTTCGACGCCGCCGTTTCACTTCGAAGAAGCTAATCTTC
ACTGCCTTGAGCCATGGACCAAACGCAAGCGCTCAAAGCGTCCACACAAT
CCTCCAACTGAAGAAGAGTATCTCGCGCTCTGCCTCGTCATGCTTGCACG
TGGCACAACCTCCACCGCCGTCTTAACTAACTGCAACACGACCACCGCCG
CCTCACAGCGACAGAAGTCTCCTGCTCTATCTACTGCTGCAACGACGTCG
TCCTCTGACCAGAAGCTTCTCTTCAAGTGCAGCGTGTGCGACAAGGCGTT
TTCTTCTTACCAAGCCTTGGGTGGTCACAAGGCCAGCCACCGTAAGGGAT
CTGGGGGCGGCGATGAACACTCCGCATCCACTACCACCAACACCAACGCA
ACC
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