CF504393

Overview
NameCF504393
Unique NameCF504393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504393 vs. ExPASy Swiss-Prot
Match: PIP_AERSO (Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.200e-32
Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = 3
Query:   18 PTESSGWINKACEEFRVVLMDQRGTGLSTPLSVSSMLQMKSAKDLVDYLKHFRADSIVNDAEFIRVRLDPDAKPWTVLGQSYGGFCAVTYLSFAPQGLKQVXXXXXXXXXXNGCSADSVYRVAFEQVIRQNEKYYKRFPQDVEIVREIVKHL 473
            P+ + GWI +A +EFRV+L+DQRGTG STP+  + +L   + +   DYL HFRADSIV DAE IR +L PD  PW++LGQS+GGFC++TYLS  P  L +V           G SAD VYR  +++V  +N  ++ RFP    I   +  HL
Sbjct:   68 PSANGGWIKRALQEFRVLLLDQRGTGHSTPIH-AELLAHLNPRQQADYLSHFRADSIVRDAELIREQLSPD-HPWSLLGQSFGGFCSLTYLSLFPDSLHEVYLTGGVAPI--GRSADEVYRATYQRVADKNRAFFARFPHAQAIANRLATHL 215          
The following BLAST results are available for this feature:
BLAST of CF504393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PIP_AERSO1.200e-3246.71Proline iminopeptidase OS=Aeromonas sobria GN=pip ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-882 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504393 ID=CF504393; Name=CF504393; organism=Citrus sinensis; type=EST; length=517bp
GTTTTGAATGCCGGGGGCCAACTGAATCCAGTGGATGGATAAATAAAGCA
TGTGAAGAATTTCGTGTTGTATTGATGGATCAGAGAGGAACAGGCTTATC
TACTCCTCTGTCAGTATCATCTATGCTGCAAATGAAGTCTGCTAAGGATT
TAGTTGACTACTTAAAACATTTTAGAGCTGATAGTATTGTAAATGACGCT
GAATTCATCCGTGTTCGTCTTGATCCTGATGCTAAACCTTGGACGGTCTT
GGGCCAGAGCTATGGTGGTTTTTGTGCGGTCACCTATTTGAGTTTTGCAC
CACAAGGGCTCAAACAAGTCCTTCTAACTGGAGGAACTCCTCCTTTAGGA
AATGGTTGCTCTGCAGATTCTGTGTACAGAGTGGCCTTTGAACAAGTTAT
TCGTCAAAACGAGAAGTATTACAAGAGATTTCCTCAGGATGTTGAAATTG
TTCGTGAAATTGTGAAGCACTTGGCAGAATCCGAAGGAGGTGGGGGTCTT
CTCCCATCTGGGGGTAT
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