CF504397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.686e-71 Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYETTAR Sbjct: 25 PVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 139 HSP 2 Score: 50.0618 bits (118), Expect = 5.686e-71 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPPTSCS+ P Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.645e-70 Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TAR Sbjct: 25 PVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 139 HSP 2 Score: 50.0618 bits (118), Expect = 1.645e-70 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPPTSCS+ P Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.798e-70 Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD++KYE+TAR Sbjct: 25 PVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139 HSP 2 Score: 50.0618 bits (118), Expect = 2.798e-70 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPPTSCS+ P Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.648e-70 Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD++KYE+TAR Sbjct: 25 PVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139 HSP 2 Score: 50.0618 bits (118), Expect = 3.648e-70 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPPTSCS+ P Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.758e-70 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE TAR Sbjct: 25 PVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATAR 139 HSP 2 Score: 50.0618 bits (118), Expect = 4.758e-70 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPPTSCS+ P Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 1.795e-69 Identity = 107/115 (93.04%), Postives = 114/115 (99.13%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ EDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE+TAR Sbjct: 25 PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR 139 HSP 2 Score: 47.3654 bits (111), Expect = 1.795e-69 Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRILKELKDLQKDPP++CS+ P Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.318e-65 Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YKTDR KYE+TA+ Sbjct: 25 PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQ 139 HSP 2 Score: 43.1282 bits (100), Expect = 4.318e-65 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MASKRI KEL+DLQ+DPP SCS+ P Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.768e-64 Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTD++KYE AR Sbjct: 25 PTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMAR 139 HSP 2 Score: 43.1282 bits (100), Expect = 2.768e-64 Identity = 18/25 (72.00%), Postives = 23/25 (92.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MA++RILKELK+LQ+DPP SCS+ P Sbjct: 1 MATRRILKELKELQRDPPVSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 3.903e-60 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ +D+FHWQATIMGP DSPYAGGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTDRS+YE +AR Sbjct: 25 PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAR 139 HSP 2 Score: 37.3502 bits (85), Expect = 3.903e-60 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 31 MASKRILKELKDLQKDPPTSCSSRP 105 MA KRI +EL DL KDPP+SCS+ P Sbjct: 1 MALKRINRELADLGKDPPSSCSAGP 25
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 8.648e-60 Identity = 91/115 (79.13%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P+ +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPK++F TK++HPNIN+NG+ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYE TAR Sbjct: 26 PVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAR 140 HSP 2 Score: 40.817 bits (94), Expect = 8.648e-60 Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 +SKRI KEL DL++DPPTSCS+ P Sbjct: 3 SSKRIAKELSDLERDPPTSCSAGP 26 The following BLAST results are available for this feature:
BLAST of CF504397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 262
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504397 ID=CF504397; Name=CF504397; organism=Citrus sinensis; type=EST; length=449bpback to top |