CF504407

Overview
NameCF504407
Unique NameCF504407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length294
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504407 vs. ExPASy Swiss-Prot
Match: ANM5_ORYSJ (Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.327e-31
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 1 
Query:    1 AIIHTDSFLTNARGYPCLSRRHQKLITGFLNHSIQVVISGKLNHGVPSVSLDSALDHTGTNVESSQRHSLRPYLDYIAYLYQRMDPLPEQERFELSYR 294
            AI+ T++FLTNARGYPCLS+RHQKL+TGF NHS+QV+ISG+ NH V    + S  D   T  +++ RH+L PYLDYIAY+YQRMDPLPEQERFE++YR
Sbjct:  223 AILQTNAFLTNARGYPCLSKRHQKLLTGFFNHSVQVIISGRSNHNVSQGGVLSG-DENHTE-DTAVRHALSPYLDYIAYIYQRMDPLPEQERFEINYR 318
[Close]
BLAST of CF504407 vs. ExPASy Swiss-Prot
Match: ANM5_ORYSI (Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. indica GN=PRMT5 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.327e-31
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 1 
Query:    1 AIIHTDSFLTNARGYPCLSRRHQKLITGFLNHSIQVVISGKLNHGVPSVSLDSALDHTGTNVESSQRHSLRPYLDYIAYLYQRMDPLPEQERFELSYR 294
            AI+ T++FLTNARGYPCLS+RHQKL+TGF NHS+QV+ISG+ NH V    + S  D   T  +++ RH+L PYLDYIAY+YQRMDPLPEQERFE++YR
Sbjct:  223 AILQTNAFLTNARGYPCLSKRHQKLLTGFFNHSVQVIISGRSNHNVSQGGVLSG-DENHTE-DTAVRHALSPYLDYIAYIYQRMDPLPEQERFEINYR 318
[Close]
BLAST of CF504407 vs. ExPASy Swiss-Prot
Match: ANM5_ARATH (Protein arginine N-methyltransferase 5 OS=Arabidopsis thaliana GN=PMRT5 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.572e-24
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 1 
Query:    1 AIIHTDSFLTNARGYPCLSRRHQKLITGFLNHSIQVVISGKLNHGVPSVSLDSALDHTGTNVESSQRHSLRPYLDYIAYLYQRMDPLPEQERFELSYR 294
            AI+ TD+FLTNARGYPCLS+RHQKLI GF +H+ QVVI GK     P  +L   LD   ++ E ++++ LR YLDY+AYL+Q+M+ L EQER EL YR
Sbjct:  222 AILSTDAFLTNARGYPCLSKRHQKLIAGFFDHAAQVVICGK-----PVHNLQKPLD---SSSEGTEKNPLRIYLDYVAYLFQKMESLSEQERIELGYR 311
The following BLAST results are available for this feature:
BLAST of CF504407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ANM5_ORYSJ1.327e-3165.31Protein arginine N-methyltransferase 5 OS=Oryza sa... [more]
ANM5_ORYSI1.327e-3165.31Protein arginine N-methyltransferase 5 OS=Oryza sa... [more]
ANM5_ARATH4.572e-2457.14Protein arginine N-methyltransferase 5 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-896 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504407 ID=CF504407; Name=CF504407; organism=Citrus sinensis; type=EST; length=294bp
GCCATAATTCATACTGATTCTTTTCTAACCAATGCACGGGGTTATCCATG
CCTGTCTCGGCGCCACCAGAAGCTCATTACTGGGTTTCTTAACCATTCTA
TACAGGTAGTTATTTCAGGAAAACTTAACCATGGTGTTCCCAGTGTGAGC
TTGGATTCTGCTTTAGACCATACTGGTACTAATGTTGAGAGCTCTCAGAG
ACATTCCCTGAGGCCATATTTGGACTATATTGCTTACCTCTATCAAAGGA
TGGATCCCCTTCCAGAGCAAGAACGTTTTGAGCTCAGTTACAGG
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