CF504411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX11A_ARATH (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.783e-34 Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 3 Query: 54 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 RDFLNHLE YL+KRDGVDKLLK+SRYATKIILASS++PET + RLKSFESSVG+SRKAFRLGKFVQD+NALR+S D S +L+L +IAYGGE Sbjct: 15 RDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPRLKSFESSVGVSRKAFRLGKFVQDINALRSSRWD--SNHELVLLIIAYGGE 108
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX113_ORYSJ (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 54 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 RDFL H+EAYL++RDGVDKLLK+SRYA ++ LA+ LP + RLKSFESSVGLSRKAFRLGKFVQ+VNALR + ++++AYGGE Sbjct: 23 RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARLKSFESSVGLSRKAFRLGKFVQNVNALR-----AHPHPPPAVALLAYGGE 111
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX113_ORYSI (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 54 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 RDFL H+EAYL++RDGVDKLLK+SRYA ++ LA+ LP + RLKSFESSVGLSRKAFRLGKFVQ+VNALR + ++++AYGGE Sbjct: 23 RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARLKSFESSVGLSRKAFRLGKFVQNVNALR-----AHPHPPPAVALLAYGGE 111
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX112_ORYSJ (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica GN=PEX11-2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 3 Query: 54 RDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP--LTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 RD L H+EAYL++RDGVD LLK+S YA ++ LA + LP T RL+SFESSVGLSRKAFRLGKFVQ +NALR + +L ++AYGG+ Sbjct: 25 RDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPPLPHAATARLRSFESSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQ 122
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX114_ORYSJ (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica GN=PEX11-4 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.336e-11 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 57 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 D L+ L +LAKRDG+DKL+K +Y +K LA + P L GR K++E+S GLSRKAFR G+F+ +N LR + E L+V+A GE Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSK--LAHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFLTGLNGLRRA-----PGEFGALAVLANAGE 93
BLAST of CF504411 vs. ExPASy Swiss-Prot
Match: PX114_ORYSI (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica GN=PEX11-4 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.336e-11 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 3 Query: 57 DFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLP-LTGRLKSFESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 341 D L+ L +LAKRDG+DKL+K +Y +K LA + P L GR K++E+S GLSRKAFR G+F+ +N LR + E L+V+A GE Sbjct: 5 DTLDKLVVFLAKRDGIDKLVKTFQYVSK--LAHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFLTGLNGLRRA-----PGEFGALAVLANAGE 93 The following BLAST results are available for this feature:
BLAST of CF504411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504411 ID=CF504411; Name=CF504411; organism=Citrus sinensis; type=EST; length=342bpback to top |