CF504441

Overview
NameCF504441
Unique NameCF504441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length233
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5487 contig Csv1_Contig5487:394..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF504441 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.668e-32
Identity = 65/70 (92.86%), Postives = 66/70 (94.29%), Query Frame = 3 
Query:   24 PHNPTHFPDGSLDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPV 233
            PHNP  F DGSLDKPV YSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIG+GASSTVYKCVLKNCKPV
Sbjct:  604 PHNPPPFLDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPV 673
[Close]
BLAST of CF504441 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.573e-16
Identity = 36/49 (73.47%), Postives = 46/49 (93.88%), Query Frame = 3 
Query:   87 KLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPV 233
            KLVILHM+MA+H ++DIMR+TENL+EK+IIGYGASSTVYKC LK+ +P+
Sbjct:  625 KLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPI 673
[Close]
BLAST of CF504441 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.330e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:   87 KLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPV 233
            KLVILHM+MA+H ++DIMR+TENL EKYIIGYGASSTVYKC  K  +P+
Sbjct:  628 KLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPI 676
The following BLAST results are available for this feature:
BLAST of CF504441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ERECT_ARATH2.668e-3292.86LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH4.573e-1673.47LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH1.330e-1573.47LRR receptor-like serine/threonine-protein kinase ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-930 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504441 ID=CF504441; Name=CF504441; organism=Citrus sinensis; type=EST; length=233bp
TGGATTGTGTGGTCGGCATGCTGCCACACAATCCTACTCATTTTCCAGAT
GGATCACTTGACAAACCAGTTAATTACTCCACTCCCAAGTTAGTGATCCT
TCACATGAACATGGCACTTCATGTGTATGAAGACATTATGAGGATGACCG
AGAATTTGAGTGAGAAGTACATAATTGGTTATGGGGCATCGAGTACAGTG
TACAAGTGTGTTCTTAAAAATTGTAAGCCAGTG
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