CF504452

Overview
NameCF504452
Unique NameCF504452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length328
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:309..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.172e-58
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGI WATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN
Sbjct:   26 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGICWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.467e-56
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTELVHE+RNGTYQWIVKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YETTELVHESRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 3.833e-55
Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHE +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YQTTELVHEEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.540e-55
Identity = 99/108 (91.67%), Postives = 104/108 (96.30%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVH+ +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YQTTELVHDEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.902e-54
Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVN
Sbjct:   26 YETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.902e-54
Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVN
Sbjct:   26 YETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.747e-53
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHEN+NG +QW VKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLT GVIANREGISWATK+ VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKEKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.571e-51
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 3
Query:    3 YETTELVHENRN--GTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHENR   G YQWIVKPKTV+Y FKTD  VPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD +QQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YDTTELVHENRKDAGGYQWIVKPKTVQYHFKTDTRVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVN 135          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 2.571e-51
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTE+VHEN NG YQWIVKPK VKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEE+YAPFKS++PMVN
Sbjct:   26 YETTEVVHENVNGAYQWIVKPKVVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEMYAPFKSLVPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.276e-50
Identity = 91/108 (84.26%), Postives = 102/108 (94.44%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTELVHE RNG+YQW+VKPK+V+Y+FKTD  VP+LGVMLVGWGGNNGSTLT GVIANREGISW TK+ VQQANYFGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YETTELVHEVRNGSYQWVVKPKSVQYQFKTDTRVPRLGVMLVGWGGNNGSTLTAGVIANREGISWVTKEKVQQANYFGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVN 133          
The following BLAST results are available for this feature:
BLAST of CF504452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA2.172e-5899.07Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_SESIN3.467e-5694.44Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_TOBAC3.833e-5592.59Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_NICPA8.540e-5591.67Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO2_ARATH1.902e-5490.74Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_WHEAT1.902e-5490.74Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO3_ARATH2.747e-5388.89Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_MESCR2.571e-5187.27Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_BRANA2.571e-5186.11Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_SPIPO1.276e-5084.26Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-941 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504452 ID=CF504452; Name=CF504452; organism=Citrus sinensis; type=EST; length=328bp
ATTATGAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAG
TGGATTGTCAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCA
TGTCCCTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCT
CAACTCTCACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCC
ACAAAGGACACAGTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGC
ATCAGCAATTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCAT
TCAAGAGCATTCTCCCTATGGTGAACCC
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